RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 HTD2P86397 168 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 GALK2Q01415 458 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CA9Q16790 459 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PHLDA2Q53GA4 152 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ELFN2Q5R3F8 820 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SUSD4Q5VX71 490 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 KCTD11Q693B1 232 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 C11orf63Q6NUN7 778 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MFSD7Q6UXD7 560 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CCNI2Q6ZMN8 369 aaPredicted RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MCM10Q7L590 875 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MIER3Q7Z3K6 550 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 RD3Q7Z3Z2 195 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PRSS42Q7Z5A4 293 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PHLDB2Q86SQ0 1253 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 GLCCI1Q86VQ1 547 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PTOV1Q86YD1 416 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ODF3L1Q8IXM7 274 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 C1orf87Q8N0U7 546 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CRYBG2Q8N1P7 616 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PGBD5Q8N414 524 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ARFGAP1Q8N6T3 406 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MRPL43Q8N983 215 aaKnown RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CNNM3Q8NE01 707 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 OR13J1Q8NGT2 312 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SPATA22Q8NHS9 363 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 KIAA1524Q8TCG1 905 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 RNF128Q8TEB7 428 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SLC20A1Q8WUM9 679 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 FAM46BQ96A09 425 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PHF21AQ96BD5 680 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 DHX58Q96C10 678 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PYCR2Q96C36 320 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CHFRQ96EP1 664 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 DTD2Q96FN9 168 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CDKN2AIPNLQ96HQ2 116 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SLX1AQ9BQ83 275 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ATG101Q9BSB4 218 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SLC25A33Q9BSK2 321 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PRRG4Q9BZD6 226 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ACPTQ9BZG2 426 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SEMA4CQ9C0C4 833 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 VN1R1Q9GZP7 353 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PCDH9Q9HC56 1237 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PHPT1Q9NRX4 125 aaPredicted RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 GKN1Q9NS71 199 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TAS2R3Q9NYW6 316 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TBK1Q9UHD2 729 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TRMT6Q9UJA5 497 aaKnown RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 AGO1Q9UL18 857 aaKnown RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 AMDHD2Q9Y303 409 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 OR2W1Q9Y3N9 320 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 JRKLQ9Y4A0 524 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ATP8B3O60423 1300 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PDS5AQ29RF7 1337 aaKnown RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TEX13DA0A0J9YY54 714 aaPredicted RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MED19A0JLT2 244 aaPredicted RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ILVBLA1L0T0 632 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CASTOR2A6NHX0 329 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TLR4O00206 839 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 MID1O15344 667 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ATP9AO75110 1047 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RBMXL2O75526 392 aaKnown RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 RPS6KA5O75582 802 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SERPINI2O75830 405 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KDM4BO94953 1096 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CLDN14O95500 239 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CXCL14O95715 111 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PTBP3O95758 552 aaKnown RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TGFAP01135 160 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 IFNB1P01574 187 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 C9P02748 559 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SERPING1P05155 500 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 LIPFP07098 398 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 IGHV4-30-4P0DP06 118 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 PRF1P14222 555 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 IRF2P14316 349 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 HOXB2P14652 356 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ETS1P14921 441 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CKMT2P17540 419 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 HOXA11P31270 313 aaPredicted RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SFNP31947 248 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 OR3A1P47881 315 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CDX1P47902 265 aaPredicted RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 INHBCP55103 352 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CLDN15P56746 228 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 KRTAP10-2P60368 255 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 GMFBP60983 142 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 CX3CL1P78423 397 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 BNC1Q01954 994 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 AKAP17AQ02040 695 aaKnown RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 GCNT1Q02742 428 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 SRSF1Q07955 248 aaKnown RBP eCLIP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 ILF2Q12905 390 aaKnown RBP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 FHL2Q14192 279 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 NONOQ15233 471 aaKnown RBP eCLIP3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 UGP2Q16851 508 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 TMEM35AQ53FP2 167 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 XKR9Q5GH70 373 aa3.08□□□□□ -1.92
SCARNA15.2-201ENST00000516409 NDUFAF5Q5TEU4 345 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms