RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 FBXO5Q9UKT4 447 aa11.09□□□□□ -0.63
VCAN-212ENST00000515397 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
VCAN-212ENST00000515397 SNX24Q9Y343 169 aa11.09□□□□□ -0.63
VCAN-212ENST00000515397 A0A0J9YY10 115 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 CDC14CA4D256 554 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 PFDN6O15212 129 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 MAP3K7O43318 606 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ZNF749O43361 778 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 NRP2O60462 931 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 PGAM1P18669 254 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 MAGP20916 626 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 GABRB3P28472 473 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 CASQ1P31415 396 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ELK3P41970 407 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 CARSP49589 748 aaKnown RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 CLCN7P51798 805 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 FOXL2P58012 376 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 C19orf57Q0VDD7 668 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 CDC20Q12834 499 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 NFATC3Q12968 1075 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 MAP7Q14244 749 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 CRYMQ14894 314 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 SF1Q15637 639 aaKnown RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 COLEC12Q5KU26 742 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 RNF187Q5TA31 235 aaPredicted RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 TTC23LQ6PF05 361 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 UNC5DQ6UXZ4 953 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 SYT10Q6XYQ8 523 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 KCNMB4Q86W47 210 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 TMEM151BQ8IW70 566 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ZNF655Q8N720 491 aaPredicted RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 DENND1AQ8TEH3 1009 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 N4BP2L2Q92802 583 aaPredicted RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 SLCO2A1Q92959 643 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 FCRL4Q96PJ5 515 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 GPR21Q99679 349 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 MIPEPQ99797 713 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ACAT2Q9BWD1 397 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 SLC7A5P2Q9GIP4 190 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 TWSG1Q9GZX9 223 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ACTL8Q9H568 366 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ACTR5Q9H9F9 607 aaPredicted RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 FANCEQ9HB96 536 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 PPANQ9NQ55 473 aaKnown RBP11.08□□□□□ -0.64
VCAN-212ENST00000515397 STARD5Q9NSY2 213 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 IRAK4Q9NWZ3 460 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 SERTAD3Q9UJW9 196 aa11.08□□□□□ -0.64
VCAN-212ENST00000515397 ARHGEF33A8MVX0 844 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 EFCAB8A8MWE9 144 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 H3BMM5 538 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 TK2O00142 265 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 MEN1O00255 615 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 RASGRF2O14827 1237 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 KPNA5O15131 536 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 TP73O15350 636 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CPNE3O75131 537 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 PIAS1O75925 651 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CBSLP0DN79 551 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 MCM3P25205 808 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CBSP35520 551 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 GABRA4P48169 554 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 ITGA1P56199 1179 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 TIAL1Q01085 375 aaKnown RBP eCLIP11.07□□□□□ -0.64
VCAN-212ENST00000515397 C2orf54Q08AI8 447 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 GBX1Q14549 363 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 SLC9A5Q14940 896 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 KIR2DS3Q14952 304 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 FASTKD3Q14CZ7 662 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 RBM20Q5T481 1227 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 FCRL6Q6DN72 434 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 HIBCHQ6NVY1 386 aaPredicted RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 TRMT10BQ6PF06 316 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 BORAQ6PGQ7 559 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 FIGLAQ6QHK4 219 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 SUSD1Q6UWL2 747 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CYHR1Q6ZMK1 362 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 PCGF5Q86SE9 256 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CPNE9Q8IYJ1 553 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CARFQ8N187 725 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 DNAJC22Q8N4W6 341 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 PPFIBP2Q8ND30 876 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 OR2L8Q8NGY9 312 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 MED8Q96G25 268 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 WBP1Q96G27 269 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 FOPNLQ96NB1 174 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 PKP4Q99569 1192 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 CCDC68Q9H2F9 335 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 DPH5Q9H2P9 285 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 ZNF71Q9NQZ8 489 aaPredicted RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 PCMTD2Q9NV79 361 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 INTS10Q9NVR2 710 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 STOX2Q9P2F5 926 aaPredicted RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 DHCR7Q9UBM7 475 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 FARSAQ9Y285 508 aaKnown RBP11.07□□□□□ -0.64
VCAN-212ENST00000515397 COL6A6A6NMZ7 2263 aa11.07□□□□□ -0.64
VCAN-212ENST00000515397 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
VCAN-212ENST00000515397 A0A1W2PPV9 198 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms