RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 HIST1H2ABP04908 130 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 CYP11A1P05108 521 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 RPLP2P05387 115 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 RARAP10276 462 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 NRIP1P48552 1158 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 PPT1P50897 306 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ATP4BP51164 291 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 OSTNP61366 133 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 H3F3AP84243 136 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 RBBP4Q09028 425 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 RASGEF1BQ0VAM2 473 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 DAG1Q14118 895 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ALX1Q15699 326 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 MINDY4Q4G0A6 757 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 PAN2Q504Q3 1202 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 ATXN7L2Q5T6C5 722 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 AGAP6Q5VW22 663 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 HIST3H2AQ7L7L0 130 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 SATL1Q86VE3 508 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 SULF1Q8IWU6 871 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 FAM20CQ8IXL6 584 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 COMMD1Q8N668 190 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 C11orf65Q8NCR3 313 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 TMEM104Q8NE00 496 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 FBXO36Q8NEA4 188 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 OR2D3Q8NGH3 330 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 STT3BQ8TCJ2 826 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 C1orf54Q8WWF1 131 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 HIST1H2ACQ93077 130 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 GJA10Q969M2 543 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 HDAC10Q969S8 669 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ADIPOR1Q96A54 375 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 C1GALT1C1Q96EU7 318 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 FEM1CQ96JP0 617 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ZNF512Q96ME7 567 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 CMTM3Q96MX0 182 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 AGAP4Q96P64 663 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 FAM83CQ9BQN1 747 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ADAM33Q9BZ11 813 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ZCCHC2Q9C0B9 1178 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.51□□□□□ -1.85
USP53-205ENST00000509769 TMPRSS5Q9H3S3 457 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ATP13A3Q9H7F0 1226 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ATP13A1Q9HD20 1204 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 IL17RBQ9NRM6 502 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 VAPAQ9P0L0 249 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 MARCOQ9UEW3 520 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 CYP8B1Q9UNU6 501 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 SNX10Q9Y5X0 201 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ALG6Q9Y672 507 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ELOA3CA0A087WX78 387 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 FAM166BA8MTA8 275 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 KLF11O14901 512 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ITGBL1O95965 494 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 PDGFAP04085 211 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 PLEKP08567 350 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 H2AFB2P0C5Z0 115 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 CCNYL3P0C7X3 344 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 CYP11B1P15538 503 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 NFYBP25208 207 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 PTPN3P26045 913 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 NTSP30990 170 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 BMP8BP34820 402 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 RYKP34925 604 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 CAP2P40123 477 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 GABRA2P47869 451 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 GIPRP48546 466 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ZNF280AP59817 542 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 SCGB2A2Q13296 93 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 RFTN1Q14699 578 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 PGM5Q15124 567 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 SF3A2Q15428 464 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 SF1Q15637 639 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 TIGD6Q17RP2 521 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 SLC2A7Q6PXP3 512 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 XKR5Q6UX68 686 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 MFSD7Q6UXD7 560 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ETV3LQ6ZN32 361 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 CLNKQ7Z7G1 428 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 TMPRSS11BQ86T26 416 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 MRPL41Q8IXM3 137 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 GHDCQ8N2G8 530 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ZNF808Q8N4W9 903 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 DEFB123Q8N688 67 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ZNF527Q8NB42 609 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 TCP10LQ8TDR4 215 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 FGGYQ96C11 551 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ASB9Q96DX5 294 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ELMOD3Q96FG2 381 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 KLHL15Q96M94 604 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 HEXIM2Q96MH2 286 aaKnown RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 FAM193BQ96PV7 902 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 PANX3Q96QZ0 392 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 TREX2Q9BQ50 279 aaPredicted RBP3.51□□□□□ -1.85
USP53-205ENST00000509769 ZNF251Q9BRH9 671 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ORAI3Q9BRQ5 295 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 ZNF700Q9H0M5 742 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 LDAHQ9H6V9 325 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 CWH43Q9H720 699 aa3.51□□□□□ -1.85
USP53-205ENST00000509769 EVA1AQ9H8M9 152 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms