RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 BMP7P18075 431 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 POLR2CP19387 275 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINB10P48595 397 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GALCP54803 685 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CYP4F2P78329 520 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TUBB3Q13509 450 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 KRR1Q13601 381 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TLR1Q15399 786 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TOR1AIP1Q5JTV8 583 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF648Q5T619 568 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C1orf146Q5VVC0 180 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 LCLAT1Q6UWP7 414 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C3orf62Q6ZUJ4 267 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 AGGF1Q8N302 714 aaeCLIP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ZSCAN4Q8NAM6 433 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FAM13CQ8NE31 585 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CADM4Q8NFZ8 388 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FIBINQ8TAL6 211 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SPATA5L1Q9BVQ7 753 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 IL1RL2Q9HB29 575 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GPAMQ9HCL2 828 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF71Q9NQZ8 489 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TMLHEQ9NVH6 421 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ATAD3AQ9NVI7 634 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 STMN3Q9NZ72 180 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SPATA7Q9P0W8 599 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CDYLQ9Y232 598 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 KCNK6Q9Y257 313 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CLCA3PQ9Y6N3 262 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CHD5Q8TDI0 1954 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM64BA6NI03 449 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 EIF1AYO14602 144 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OR6B1O95007 311 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MT-CO3P00414 261 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RBP1P09455 135 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DRD4P21917 467 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GRIA4P48058 902 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINB8P50452 374 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CCNHP51946 323 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GTF2A1P52655 376 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PSMD4P55036 377 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 AP1S1P61966 158 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ETF1P62495 437 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DSC1Q08554 894 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 STX3Q13277 289 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DCTN2Q13561 401 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SF3B4Q15427 424 aaKnown RBP eCLIP2.89□□□□□ -1.951e-17■■■■■ 61.1
NEDD4-208ENST00000508342 NFIL3Q16649 462 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GPAT3Q53EU6 434 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 N4BP2L1Q5TBK1 243 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PMF1Q6P1K2 205 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PLBD1Q6P4A8 553 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C17orf64Q86WR6 236 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ST13P4Q8IZP2 240 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NLGN4XQ8N0W4 816 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MIER2Q8N344 545 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RCBTB1Q8NDN9 531 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DNAAF1Q8NEP3 725 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NLGN4YQ8NFZ3 816 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CKAP2Q8WWK9 683 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PWWP2AQ96N64 755 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TBC1D10AQ9BXI6 508 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 LRMDAQ9H2I8 198 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 XPNPEP1Q9NQW7 623 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 POLR3BQ9NW08 1133 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ADPRHL2Q9NX46 363 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MAPRE3Q9UPY8 281 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 HPSEQ9Y251 543 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 WDR81Q562E7 1941 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 UNC13CQ8NB66 2214 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ILVBLA1L0T0 632 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OR5K4A6NMS3 321 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MKRN2OSH3BPM6 223 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF208O43345 1280 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 VNN1O95497 513 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OLFM2O95897 454 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PIGRP01833 764 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 C1SP09871 688 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SLC35G6P0C7Q6 338 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 M6PRP20645 277 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ARHGDIBP52566 201 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CAPZA1P52907 286 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ACTR3P61158 418 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 STXBP1P61764 594 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ACY1Q03154 408 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PLP2Q04941 152 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 IL10RBQ08334 325 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MAD2L1Q13257 205 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TYW3Q6IPR3 259 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ALKAL1Q6UXT8 129 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 EPHX4Q8IUS5 362 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SLC9A9Q8IVB4 645 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SPERTQ8NA61 448 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GALNT6Q8NCL4 622 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SPPL2AQ8TCT8 520 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GPBAR1Q8TDU6 330 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NINJ1Q92982 152 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FAM118BQ9BPY3 351 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TUBA1CQ9BQE3 449 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 HGH1Q9BTY7 390 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms