RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF611Q8N823 705 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 MAPKAPK5-AS1Q8N8E1 139 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 PPFIBP2Q8ND30 876 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 DMBX1Q8NFW5 382 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 VANGL1Q8TAA9 524 aaPredicted RBP3.18□□□□□ -1.9
LSM6-205ENST00000507449 DEPDC1BQ8WUY9 529 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 PIGBQ92521 554 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 CORO2AQ92828 525 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 SENP5Q96HI0 755 aaPredicted RBP3.18□□□□□ -1.9
LSM6-205ENST00000507449 GBP5Q96PP8 586 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 SPAG5Q96R06 1193 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 TUBB2BQ9BVA1 445 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 PFDN4Q9NQP4 134 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 GKN1Q9NS71 199 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 TBC1D7Q9P0N9 293 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 ZNF580Q9UK33 172 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 SLC7A7Q9UM01 511 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 CASTOR2A6NHX0 329 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 P2RY10O00398 339 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 DNM1LO00429 736 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 ATP6AP2O75787 350 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 CRYAAP02489 173 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 INHBAP08476 426 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 FRMD6-AS1P0C7T7 363 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 IGHV4-38-2P0DP08 117 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 PAX1P15863 534 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 EEF1B2P24534 225 aaKnown RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 CAPZA1P52907 286 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 PDX1P52945 283 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 NAGLUP54802 743 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 CDH11P55287 796 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 KRT83P78385 493 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 RPL36AP83881 106 aaKnown RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 TAF10Q12962 218 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 RBBP5Q15291 538 aaKnown RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 NPTX1Q15818 432 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 ZC2HC1CQ53FD0 456 aaPredicted RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 XKR3Q5GH77 459 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 CCNYL2Q5T2Q4 361 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 SUSD4Q5VX71 490 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 FAM91A1Q658Y4 838 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 C19orf48Q6RUI8 117 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 IL17RELQ6ZVW7 336 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 ZNF554Q86TJ5 538 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 MMD2Q8IY49 270 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 DNAJC22Q8N4W6 341 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 METTL27Q8N6F8 245 aaPredicted RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 SETD6Q8TBK2 473 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 CCDC107Q8WV48 283 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 KCNE4Q8WWG9 221 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 FAM162AQ96A26 154 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 STAMBPL1Q96FJ0 436 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 LMLNQ96KR4 655 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 ZNF354BQ96LW1 612 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 JAKMIP1Q96N16 626 aaKnown RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 EGFL8Q99944 293 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 CITED2Q99967 270 aaPredicted RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 THUMPD3Q9BV44 507 aaKnown RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 ALDH8A1Q9H2A2 487 aaPredicted RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 ZWILCHQ9H900 591 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 UPF2Q9HAU5 1272 aaKnown RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 GRPEL1Q9HAV7 217 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 SDR39U1Q9NRG7 319 aaPredicted RBP3.17□□□□□ -1.9
LSM6-205ENST00000507449 COQ3Q9NZJ6 369 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 STK26Q9P289 416 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 ZDHHC2Q9UIJ5 367 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 GTF3C4Q9UKN8 822 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 LRP12Q9Y561 859 aa3.17□□□□□ -1.9
LSM6-205ENST00000507449 IGLV9-49A0A0B4J1Y8 123 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 LOC101059948A0A1B0GTJ6 334 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 A0A1W2PN81 502 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 ARHGEF37A1IGU5 675 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 HTR3EA5X5Y0 456 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 DUXAA6NLW8 204 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 PI4K2BG5E9Z4 385 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 H0Y626 953 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 KRT36O76013 467 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 GSRP00390 522 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 PLA2G4BP0C869 781 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 SAGP10523 405 aaPredicted RBP3.16□□□□□ -1.9
LSM6-205ENST00000507449 TGFB3P10600 412 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 LIFP15018 202 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 GNAZP19086 355 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 MUTP22033 750 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 ACAT1P24752 427 aaKnown RBP3.16□□□□□ -1.9
LSM6-205ENST00000507449 CHRNA7P36544 502 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 MNDAP41218 407 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 NKX2-1P43699 371 aaPredicted RBP3.16□□□□□ -1.9
LSM6-205ENST00000507449 BMXP51813 675 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 GSDMDP57764 484 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 LINC01547P58512 204 aaPredicted RBP3.16□□□□□ -1.9
LSM6-205ENST00000507449 TUBB4BP68371 445 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 DLK1P80370 383 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 TAZQ16635 292 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 CYP4A22Q5TCH4 519 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 RUSC1-AS1Q66K80 236 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 C11orf63Q6NUN7 778 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 PET117Q6UWS5 81 aa3.16□□□□□ -1.9
LSM6-205ENST00000507449 TMEM182Q6ZP80 229 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms