RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RASGRF2O14827 1237 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 VPS4BO75351 444 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 DNAJB5O75953 348 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 IPO13O94829 963 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 ALBP02768 609 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 ESR1P03372 595 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 ALPPP05187 535 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 ETS1P14921 441 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 GRM7Q14831 915 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 MLIPQ5VWP3 458 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 TRIM73Q86UV7 250 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 FAM26EQ8N5C1 309 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 ZBTB2Q8N680 514 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 OTUD6BQ8N6M0 293 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 CLEC1AQ8NC01 280 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 GALNT11Q8NCW6 608 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 OR2Y1Q8NGV0 311 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 HMGCLL1Q8TB92 370 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 TM9SF4Q92544 642 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 FKBP10Q96AY3 582 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 PTERQ96BW5 349 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 NAP1L3Q99457 506 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 P2RY12Q9H244 342 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 LZTFL1Q9NQ48 299 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 EURLQ9NYK6 297 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 NXT1Q9UKK6 140 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 VPS4AQ9UN37 437 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 CEP104O60308 925 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 SRPX2O60687 465 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 ONECUT2O95948 504 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 ZSCAN5DPP0CG00 497 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 TPBGLP0DKB5 382 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 NR1D1P20393 614 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 OGNP20774 298 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 CSE1LP55060 971 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 SEMA3AQ14563 771 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 SF1Q15637 639 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 ZIC1Q15915 447 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 FAM214AQ32MH5 1076 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 NKAIN1Q4KMZ8 207 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 COLEC12Q5KU26 742 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 VWA5B1Q5TIE3 1220 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 CPZQ66K79 652 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 KIAA0930Q6ICG6 404 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 LCN10Q6JVE6 187 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 TTC29Q8NA56 475 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 CFAP61Q8NHU2 1237 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 SMAD5Q99717 465 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 UTP6Q9NYH9 597 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 SOX13Q9UN79 622 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 PTRH2Q9Y3E5 179 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 BSNQ9UPA5 3926 aa13.88□□□□□ -0.19
HMGCS1-203ENST00000507004 A0A1B0GX78 115 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 ZNF839A8K0R7 811 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 K7EM74 188 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 PHF2O75151 1096 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 KLF7O75840 302 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 CBSLP0DN79 551 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MLNP12872 115 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 ITGAXP20702 1163 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MAGP20916 626 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 CBSP35520 551 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 HSD17B2P37059 387 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MAGEA6P43360 314 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 IGFBP7Q16270 282 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 TYSND1Q2T9J0 566 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MRPL14Q6P1L8 145 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 NAPRTQ6XQN6 538 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MRGPREQ86SM8 312 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MCATQ8IVS2 390 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 LRRC8AQ8IWT6 810 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 LMNTD2Q8IXW0 634 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 ZNF655Q8N720 491 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 LMNTD1Q8N9Z9 388 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 SKA2Q8WVK7 121 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 MENTQ9BUN1 341 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 SLC29A3Q9BZD2 475 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 SPRTNQ9H040 489 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 WDR54Q9H977 334 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 FAM114A2Q9NRY5 505 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 SAMD15Q9P1V8 674 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 KLHL42Q9P2K6 505 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 PLAGL1Q9UM63 463 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 KLK4Q9Y5K2 254 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 BOD1L1Q8NFC6 3051 aa13.87□□□□□ -0.19
HMGCS1-203ENST00000507004 CLEC18AA5D8T8 446 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 IQCF5A8MTL0 148 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 VAPBO95292 243 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 C1orf105O95561 183 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 PDGFAP04085 211 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 MGAT1P26572 445 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 NMBRP28336 390 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 PEBP1P30086 187 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 OTX2P32243 289 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 EIF3BP55884 814 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 SOX8P57073 446 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 CHAF1BQ13112 559 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms