RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RPS3P23396 243 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 FMO4P31512 558 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 GRIA3P42263 894 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 GCGRP47871 477 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 KCNJ11Q14654 390 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 TPSAB1Q15661 275 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 PAPD7Q5XG87 772 aaKnown RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 UNC5DQ6UXZ4 953 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 TAX1BP1Q86VP1 789 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 CAND1Q86VP6 1230 aaKnown RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 FDCSPQ8NFU4 85 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 TRIM58Q8NG06 486 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 OR2L8Q8NGY9 312 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 N4BP2L2Q92802 583 aaPredicted RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 MIB2Q96AX9 1013 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 DPH2Q9BQC3 489 aaPredicted RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 SLC25A23Q9BV35 468 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 MRM3Q9HC36 420 aaKnown RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 ACSS2Q9NR19 701 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 EURLQ9NYK6 297 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 SOX13Q9UN79 622 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 PLCL2Q9UPR0 1127 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 PCDHGA9Q9Y5G4 932 aaKnown RBP13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 AP1M2Q9Y6Q5 423 aa13.85□□□□□ -0.19
CDC42SE2-209ENST00000506419 PCSK5Q92824 1860 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 A6NL46 340 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 RASGRF2O14827 1237 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 MAGEA6P43360 314 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 VPS41P49754 854 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 DCDP81605 110 aaKnown RBP13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 CDK16Q00536 496 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 ATP1A4Q13733 1029 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 NADK2Q4G0N4 442 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 MRPL14Q6P1L8 145 aaKnown RBP13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 FIGLAQ6QHK4 219 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 LRRC6Q86X45 466 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 DCUN1D3Q8IWE4 304 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 DENND1AQ8TEH3 1009 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 LPGAT1Q92604 370 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 NUDT9Q9BW91 350 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 TSSK1BQ9BXA7 367 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 HOMER3Q9NSC5 361 aa13.84□□□□□ -0.19
CDC42SE2-209ENST00000506419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 MASP2O00187 686 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 AP3B1O00203 1094 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 ZSCAN9O15535 394 aaPredicted RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 NIPSNAP2O75323 286 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 S1PR4O95977 384 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 KRT14P02533 472 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 F7P08709 466 aaPredicted RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 ITGAXP20702 1163 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 BDKRB1P46663 353 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 CD97P48960 835 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 PGDP52209 483 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 EIF3BP55884 814 aaKnown RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 YBX1P67809 324 aaKnown RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 GPS1Q13098 491 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 GBX1Q14549 363 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 SSPNQ14714 243 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 SLC9A5Q14940 896 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 SF1Q15637 639 aaKnown RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 CENPUQ71F23 418 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 SDCCAG8Q86SQ7 713 aaPredicted RBP13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 PANX3Q96QZ0 392 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 DHRS4Q9BTZ2 278 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 IL1RAPL1Q9NZN1 696 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 GNPTGQ9UJJ9 305 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 SLC39A10Q9ULF5 831 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 NEU2Q9Y3R4 380 aa13.83□□□□□ -0.2
CDC42SE2-209ENST00000506419 A0A1W2PPV9 198 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 CLEC18AA5D8T8 446 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 C9J4A7 227 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 KDM1AO60341 852 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 RPN2P04844 631 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 UMODP07911 640 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 ALAS2P22557 587 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 MCM3P25205 808 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 OTX2P32243 289 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 UBAP2LQ14157 1087 aaKnown RBP13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 FASTKQ14296 549 aaKnown RBP13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 TMED2Q15363 201 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 TYSND1Q2T9J0 566 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 NKAIN1Q4KMZ8 207 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 ACSBG2Q5FVE4 666 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 MRNIPQ6NTE8 343 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 CLEC18BQ6UXF7 455 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 MED25Q71SY5 747 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 OTOAQ7RTW8 1153 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 AGGF1Q8N302 714 aaeCLIP13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 TMEM102Q8N9M5 508 aaPredicted RBP13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 CLEC18CQ8NCF0 446 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 PROKR1Q8TCW9 393 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 MAGOHBQ96A72 148 aaKnown RBP13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 RAD51AP1Q96B01 352 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 SLC22A18Q96BI1 424 aa13.82□□□□□ -0.2
CDC42SE2-209ENST00000506419 FAM136AQ96C01 138 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms