RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MKRN2Q9H000 416 aaKnown RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 ATXN3LQ9H3M9 355 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 IL1RAPQ9NPH3 570 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 TRMT13Q9NUP7 481 aaKnown RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 PAQR5Q9NXK6 330 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 MARCH4Q9P2E8 410 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 ZNF225Q9UK10 706 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 FBXO10Q9UK96 956 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 ARHGEF9O43307 516 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 LDB2O43679 373 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 RPP40O75818 363 aaKnown RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 VTNP04004 478 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 MLLT3P42568 568 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 PXNP49023 591 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 STC1P52823 247 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 FPGSQ05932 587 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 ABHD18Q0P651 414 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 TARDBPQ13148 414 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■■■□ 24.6
SCLT1-208ENST00000506368 PCSK7Q16549 785 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 TBRG1Q3YBR2 411 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 XKR4Q5GH76 650 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 SNAP47Q5SQN1 464 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 ANKRD34AQ69YU3 496 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 LAIR1Q6GTX8 287 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 IDO2Q6ZQW0 420 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 SLC22A15Q8IZD6 547 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 FAM109AQ8N4B1 249 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 OR2A14Q96R47 310 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 KRT84Q9NSB2 600 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 OLA1Q9NTK5 396 aaKnown RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 CATSPERZQ9NTU4 200 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 FKBP14Q9NWM8 211 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 PSORS1C1Q9UIG5 152 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 TNPO3Q9Y5L0 923 aaKnown RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 TRBV5-3A0A0A0MS03 114 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 A0A1B0GTL3 188 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 TEX51A0A1B0GUA7 166 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 WNT9AO14904 365 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 MITFO75030 526 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 CDK1P06493 297 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 ARL1P40616 181 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 SYT16Q17RD7 645 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 PARP15Q460N3 678 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 BCL7AQ4VC05 210 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 INO80DQ53TQ3 878 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 ARMC4Q5T2S8 1044 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 KDELC2Q7Z4H8 507 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 ZNF438Q7Z4V0 828 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 FAM9CQ8IZT9 166 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 NLGN4XQ8N0W4 816 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 BEND7Q8N7W2 519 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 RTL3Q8N8U3 475 aaKnown RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 CHTF18Q8WVB6 975 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 FAM120BQ96EK7 910 aaKnown RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 HRASLS5Q96KN8 279 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 C1orf74Q96LT6 269 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 GABARAPL3Q9BY60 117 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 NXF3Q9H4D5 531 aaKnown RBP15.53■□□□□ 0.08
SCLT1-208ENST00000506368 C12orf10Q9HB07 376 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 ASAH2Q9NR71 780 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 GIMAP4Q9NUV9 329 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 GJD2Q9UKL4 321 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 AP1M2Q9Y6Q5 423 aa15.53■□□□□ 0.08
SCLT1-208ENST00000506368 H3BQ06 376 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-208ENST00000506368 CLDN5O00501 218 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 POLR1CO15160 346 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-208ENST00000506368 SHOXO15266 292 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 STX7O15400 261 aaKnown RBP15.52■□□□□ 0.08
SCLT1-208ENST00000506368 WBP4O75554 376 aaKnown RBP15.52■□□□□ 0.08
SCLT1-208ENST00000506368 RHOBTB1O94844 696 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 IGLV3-25P01717 112 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 HLA-DPA1P20036 260 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 ARSDP51689 593 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 RACK1P63244 317 aaKnown RBP15.52■□□□□ 0.08
SCLT1-208ENST00000506368 GRB14Q14449 540 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 TTLL4Q14679 1199 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 NR6A1Q15406 480 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 AAK1Q2M2I8 961 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 MORN1Q5T089 497 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 FAM219BQ5XKK7 198 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 GALNT5Q7Z7M9 940 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 TAC4Q86UU9 113 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 TCTE3Q8IZS6 198 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 CDYL2Q8N8U2 506 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 NPLOC4Q8TAT6 608 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 TADA1Q96BN2 335 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 EGLN2Q96KS0 407 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 KIF17Q9P2E2 1029 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 KCNN3Q9UGI6 736 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 RPS6KA6Q9UK32 745 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 TBC1D24Q9ULP9 559 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 SNX10Q9Y5X0 201 aa15.52■□□□□ 0.08
SCLT1-208ENST00000506368 LOC285095A0A1B0GVY8 99 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 MEIOCA2RUB1 952 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 KRT87PA6NCN2 255 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 E2F3O00716 465 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 PER2O15055 1255 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 RECQL4O94761 1208 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 OR4F21O95013 312 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms