RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OPA1O60313 960 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PLIN3O60664 434 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRAMEF4O60810 478 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SDC3O75056 442 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 TBX6O95947 436 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 KPNA2P52292 529 aaKnown RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 ARFIP1P53367 373 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PNLIPRP1P54315 467 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 C1orf61Q13536 156 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 MPP2Q14168 576 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 MAP7Q14244 749 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 USP10Q14694 798 aaKnown RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRAMEF9Q5VWM5 478 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 FCRL6Q6DN72 434 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF517Q6ZMY9 492 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 DNAJC22Q8N4W6 341 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 UBLCP1Q8WVY7 318 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SYNPO2LQ9H987 977 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 FTSJ1Q9UET6 329 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC39A10Q9ULF5 831 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 BSNQ9UPA5 3926 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 DYNC1I1O14576 645 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 GLRA3O75311 464 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 UBXN7O94888 489 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 ASMTLO95671 621 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC166P0CW27 439 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 RGS4P49798 205 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRKAA2P54646 552 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCLAFQ15004 111 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 MROH9Q5TGP6 573 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SULT1C3Q6IMI6 304 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 RGS9BPQ6ZS82 235 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 LRRC70Q7Z2Q7 622 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 HDXQ7Z353 690 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PAQR7Q86WK9 346 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 C12orf66Q96MD2 445 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC77Q9BR77 488 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC6A20Q9NP91 592 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SIRT5Q9NXA8 310 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SIRPGQ9P1W8 387 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 IGHV5-10-1A0A0J9YXX1 117 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 HGSO14964 777 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 TM9SF1O15321 606 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 IPO13O94829 963 aaKnown RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 TRIM16O95361 564 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 GMPRP36959 345 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PDAP1Q13442 181 aaKnown RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 LGSNQ5TDP6 509 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 DUS1LQ6P1R4 473 aaKnown RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 L3MBTL4Q8NA19 623 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 RAB3IL1Q8TBN0 382 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 RAD51AP1Q96B01 352 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC3Q9BQI4 270 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 PELI2Q9HAT8 420 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 LRIT1Q9P2V4 623 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 GRID1Q9ULK0 1009 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 NPPBP16860 134 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 HRH2P25021 359 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 HALP42357 657 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 RSPO4Q2I0M5 234 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 MYO1HQ8N1T3 1032 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 C11orf24Q96F05 449 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 FCRL1Q96LA6 429 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 NTMT1Q9BV86 223 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 RHBGQ9H310 441 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM216Q9P0N5 145 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 ASB1Q9Y576 335 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 SPEGQ15772 3267 aa8.01□□□□□ -1.13
CDC42SE2-208ENST00000505065 NPEPPSL1A6NEC2 478 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 B4E171 279 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 KLF11O14901 512 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 BIRC5O15392 142 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 FFAR2O15552 330 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PHGDHO43175 533 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 CHRM3P20309 590 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 GSTM2P28161 218 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 TSPAN7P41732 249 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 BDKRB1P46663 353 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCL7P80098 99 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 ABATP80404 500 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 FASTKQ14296 549 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 RTP5Q14D33 572 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 TRIP6Q15654 476 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZIC1Q15915 447 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SPESP1Q6UW49 350 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 RAPH1Q70E73 1250 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 AMIGO1Q86WK6 493 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMPRSS12Q86WS5 348 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 LAS2Q8IYD9 372 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 GPATCH11Q8N954 259 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 FAM46DQ8NEK8 389 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 STAG3L4Q8TBR4 150 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 KCTD4Q8WVF5 259 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PPANQ9NQ55 473 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 OXSMQ9NWU1 459 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SH2B3Q9UQQ2 575 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCDHGA8Q9Y5G5 932 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms