RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SOWAHBA6NEL2 793 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 QSOX1O00391 747 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 EDIL3O43854 480 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 PRAMEF1O95521 474 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 DCKP27707 260 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 RPIAP49247 311 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 MAPK12P53778 367 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 TGM3Q08188 693 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 PIK3R6Q5UE93 754 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 RGL4Q8IZJ4 473 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 AARSD1Q9BTE6 412 aaKnown RBP16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 ATP13A3Q9H7F0 1226 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 CPQQ9Y646 472 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 MAP2K4P45985 399 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 GRB7Q14451 532 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 CLCA4Q14CN2 919 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 ANKRD26P1Q6NSI1 321 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 POPDC3Q9HBV1 291 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 SACM1LQ9NTJ5 587 aa16.87■□□□□ 0.29
HMGXB3-201ENST00000502717 SMIM35A0A1B0GVV1 85 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 COQ9O75208 318 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 PRLP01236 227 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 FGBP02675 491 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 ITGB1P05556 798 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 ATF6P18850 670 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 NTSP30990 170 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 SLC13A2Q13183 592 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 MADCAM1Q13477 382 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 TSTQ16762 297 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 SLC36A3Q495N2 470 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 NFKBIZQ9BYH8 718 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 FNIP2Q9P278 1114 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 HSPE1-MOB4S4R3N1 261 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 LCHNA4D1U4 455 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 C22orf31O95567 290 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 STARP49675 285 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 DSC3Q14574 896 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 SUZ12Q15022 739 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 COMMD3Q9UBI1 195 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 RPS6KB2Q9UBS0 482 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 MRPS23Q9Y3D9 190 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 FZD9O00144 591 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 CLIC1O00299 241 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 CDK14O94921 469 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 C1RP00736 705 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 GTF2E2P29084 291 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 MRPS6P82932 125 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 KCTD7Q96MP8 289 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 AGPAT4Q9NRZ5 378 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 ARL5AQ9Y689 179 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 NUAK1O60285 661 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 MT-ND2P03891 347 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 ANXA4P09525 319 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 MAPKAPK2P49137 400 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 KLHL22Q53GT1 634 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 C6orf136Q5SQH8 315 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 CEP97Q8IW35 865 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 CCDC36Q8IYA8 594 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 TRIT1Q9H3H1 467 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 GPN1Q9HCN4 374 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 TMEM138Q9NPI0 162 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 SMPD4Q9NXE4 827 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 NKIRAS2Q9NYR9 191 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 COMMD9Q9P000 198 aa16.86■□□□□ 0.29
HMGXB3-201ENST00000502717 NUP98P52948 1817 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 MYBPHLA2RUH7 354 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 FFAR2O15552 330 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 SMIM18P0DKX4 95 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 LEPRP48357 1165 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 METTL25Q8N6Q8 603 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ZNF614Q8N883 585 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 OR13C4Q8NGS5 318 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 UFD1Q92890 307 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ZNF486Q96H40 463 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 TM6SF2Q9BZW4 377 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 AIG1Q9NVV5 245 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 CHD4Q14839 1912 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 C7orf72A4D263 438 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 PRPS1L1P21108 318 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ITPKAP23677 461 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 UNC50Q53HI1 259 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ELMOD2Q8IZ81 293 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 CDKN2AIPNLQ96HQ2 116 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 SGK2Q9HBY8 427 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 THUMPD1Q9NXG2 353 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 TAS2R9Q9NYW1 312 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 FKBPLQ9UIM3 349 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 SPACA6W5XKT8 324 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 A0A0G2JLL6 359 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 CLDN11O75508 207 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 WEE1P30291 646 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 GJA9P57773 515 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 LIN54Q6MZP7 749 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 PRRT2Q7Z6L0 340 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 LGI4Q8N135 537 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 C10orf53Q8N6V4 93 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms