RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CRHR1P34998 444 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 TBPL1P62380 186 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 GPS2Q13227 327 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 AMZ1Q400G9 498 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC153Q494R4 210 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 FBXO48Q5FWF7 155 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 ANKS6Q68DC2 871 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 DBX2Q6ZNG2 339 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 ZNF438Q7Z4V0 828 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 SPRED1Q7Z699 444 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 AMIGO1Q86WK6 493 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 FBXO39Q8N4B4 442 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-227ENST00000498056 OR4E2Q8NGC2 313 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 BAHD1Q8TBE0 780 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-227ENST00000498056 MED8Q96G25 268 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC138Q96M89 665 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 CDC6Q99741 560 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
CPNE1-227ENST00000498056 MID2Q9UJV3 735 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 PTPRBP23467 1997 aa13.16□□□□□ -0.3
CPNE1-227ENST00000498056 FAM221BA6H8Z2 402 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 OR6C74A6NCV1 312 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 TYROBPO43914 113 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 PLIN3O60664 434 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 CBFA2T3O75081 653 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 UBXN7O94888 489 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 PROCP04070 461 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 RPLP0P05388 317 aaKnown RBP13.15□□□□□ -0.3
CPNE1-227ENST00000498056 PROS1P07225 676 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 TPBGLP0DKB5 382 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 MYL2P10916 166 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 AMD1P17707 334 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 TAC1P20366 129 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 RPA3P35244 121 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-227ENST00000498056 CAPZBP47756 277 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ACADVLP49748 655 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 PNLIPRP1P54315 467 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 EPHA4P54764 986 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 OR1D5P58170 312 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 CDKL1Q00532 357 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 FASTKQ14296 549 aaKnown RBP13.15□□□□□ -0.3
CPNE1-227ENST00000498056 NR1D2Q14995 579 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 THEMIS2Q5TEJ8 643 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ARMC6Q6NXE6 501 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 PDPRQ8NCN5 879 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ARMC2Q8NEN0 867 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 DENND1AQ8TEH3 1009 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ZNF480Q8WV37 535 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ZFPM2Q8WW38 1151 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ATL1Q8WXF7 558 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 FBXL8Q96CD0 374 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 TMEM79Q9BSE2 394 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 ATG10Q9H0Y0 220 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 SLC32A1Q9H598 525 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 UCK1Q9HA47 277 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 CCDC177Q9NQR7 707 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-227ENST00000498056 LNPEPQ9UIQ6 1025 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 KIF26BQ2KJY2 2108 aa13.15□□□□□ -0.3
CPNE1-227ENST00000498056 CEP250Q9BV73 2442 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 IGHV1OR21-1A0A087WYE8 117 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 TMEM120BA0PK00 339 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 CCDC189A1A4V9 331 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 A8MT66 165 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPNE1-227ENST00000498056 ZW10O43264 779 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 TNFSF14O43557 240 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 RFPL3O75679 317 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 CHRM5P08912 532 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-227ENST00000498056 POLR2CP19387 275 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-227ENST00000498056 KCNA4P22459 653 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 ACP1P24666 158 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PSMB5P28074 263 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 GPR3P46089 330 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 KCNC1P48547 511 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 HSPA7P48741 367 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-227ENST00000498056 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 AGTRAPQ6RW13 159 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 SUSD1Q6UWL2 747 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 TCAIMQ8N3R3 496 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PTGR2Q8N8N7 351 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-227ENST00000498056 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 RHBDF1Q96CC6 855 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 FAM122AQ96E09 287 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PHF21BQ96EK2 531 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 MENTQ9BUN1 341 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 MLXIPLQ9NP71 852 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 DMXL1Q9Y485 3027 aa13.14□□□□□ -0.31
CPNE1-227ENST00000498056 PIPSLA2A3N6 862 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms