RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MS4A10Q96PG2 267 aa4.95□□□□□ -1.62
SF3B1-212ENST00000496458 ATOH8Q96SQ7 321 aa4.95□□□□□ -1.62
SF3B1-212ENST00000496458 GIMAP4Q9NUV9 329 aa4.95□□□□□ -1.62
SF3B1-212ENST00000496458 DAPK2Q9UIK4 370 aa4.95□□□□□ -1.62
SF3B1-212ENST00000496458 FEZF1A0PJY2 475 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 ANKRD61A6NGH8 418 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 H7C423 109 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 CRLF1O75462 422 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 EIF2DP41214 584 aaKnown RBP4.94□□□□□ -1.62
SF3B1-212ENST00000496458 SLC9A3P48764 834 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 CDH13P55290 713 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 PRKG2Q13237 762 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 LPAL2Q16609 132 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 KLHL26Q53HC5 615 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 RNASEH2BQ5TBB1 312 aaKnown RBP4.94□□□□□ -1.62
SF3B1-212ENST00000496458 ARMC3Q5W041 872 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 OR11H4Q8NGC9 324 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 EXD1Q8NHP7 514 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 PHLDA1Q8WV24 401 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-212ENST00000496458 ZNF622Q969S3 477 aaKnown RBP eCLIP4.94□□□□□ -1.62
SF3B1-212ENST00000496458 RSRC1Q96IZ7 334 aaKnown RBP4.94□□□□□ -1.62
SF3B1-212ENST00000496458 SYT15Q9BQS2 421 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 SYT11Q9BT88 431 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 TRIM15Q9C019 465 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 SERINC1Q9NRX5 453 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 FGF21Q9NSA1 209 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 RNF186Q9NXI6 227 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 TMEM5Q9Y2B1 443 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 TTLL3Q9Y4R7 772 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 NME7Q9Y5B8 376 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 CEP164Q9UPV0 1460 aa4.94□□□□□ -1.62
SF3B1-212ENST00000496458 MEIS2O14770 477 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 SORBS2O94875 1100 aaKnown RBP4.93□□□□□ -1.62
SF3B1-212ENST00000496458 PRDM2Q13029 1718 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 SGSM1Q2NKQ1 1148 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 XKR6Q5GH73 641 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 LSMEM2Q8N112 164 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 MINDY1Q8N5J2 469 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 NKAIN3Q8N8D7 197 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 DBF4BQ8NFT6 615 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 PRPF31Q8WWY3 499 aaKnown RBP4.93□□□□□ -1.62
SF3B1-212ENST00000496458 ANKRD9Q96BM1 317 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-212ENST00000496458 MOCOSQ96EN8 888 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 C18orf12Q96KH6 178 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 TRIM51Q9BSJ1 452 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 URM1Q9BTM9 101 aaKnown RBP4.93□□□□□ -1.62
SF3B1-212ENST00000496458 CDK19Q9BWU1 502 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 PDE7BQ9NP56 450 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 EQTNQ9NQ60 294 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 SLC35C2Q9NQQ7 365 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 MRPL15Q9P015 296 aaKnown RBP4.93□□□□□ -1.62
SF3B1-212ENST00000496458 PAK5Q9P286 719 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 EPHA6Q9UF33 1036 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 LRWD1Q9UFC0 647 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 MRC2Q9UBG0 1479 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 PCDH11YQ9BZA8 1340 aa4.93□□□□□ -1.62
SF3B1-212ENST00000496458 THOC2Q8NI27 1593 aaKnown RBP4.92□□□□□ -1.62
SF3B1-212ENST00000496458 KHDRBS3O75525 346 aaKnown RBP4.92□□□□□ -1.62
SF3B1-212ENST00000496458 DFFBO76075 338 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 IGHV4-31P0DP07 118 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 HSPA8P11142 646 aaKnown RBP4.92□□□□□ -1.62
SF3B1-212ENST00000496458 PTPN3P26045 913 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 STK4Q13043 487 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 SQLEQ14534 574 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 SPECC1Q5M775 1068 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 SPDYCQ5MJ68 293 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 SPATA1Q5VX52 437 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 FAAP20Q6NZ36 180 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 RTN4RL2Q86UN3 420 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 ZSCAN30Q86W11 494 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 LACC1Q8IV20 430 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 ZNF595Q8IYB9 648 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 ZNF440Q8IYI8 595 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 KIRREL3Q8IZU9 778 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 EID3Q8N140 333 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 MARVELD2Q8N4S9 558 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 DCLK2Q8N568 766 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 NIPA2Q8N8Q9 360 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 OR5AP2Q8NGF4 316 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 VGLL1Q99990 258 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 FUCA2Q9BTY2 467 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 CLEC7AQ9BXN2 247 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 OPA3Q9H6K4 179 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 ATP13A3Q9H7F0 1226 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 P4HTMQ9NXG6 502 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 DPP3Q9NY33 737 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 SPHK1Q9NYA1 384 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 NOTCH3Q9UM47 2321 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 CUX2O14529 1486 aa4.92□□□□□ -1.62
SF3B1-212ENST00000496458 IGLV7-46A0A075B6I9 117 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 TMEM221A6NGB7 291 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 MSGN1A6NI15 193 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 DCXO43602 365 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 GFPT2O94808 682 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 TOMM70O94826 608 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 MOCS3O95396 460 aa4.91□□□□□ -1.62
SF3B1-212ENST00000496458 DUS4LO95620 317 aaKnown RBP4.91□□□□□ -1.62
SF3B1-212ENST00000496458 CLDN1O95832 211 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms