RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 UPK3BL2E5RIL1 263 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 B4GAT1O43505 415 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 NOBOXO60393 691 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 C8GP07360 202 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 MYCLP1P12525 358 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 VEGFBP49765 207 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 CLDN8P56748 225 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 PMS2P3Q13401 168 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ANKRD34AQ69YU3 496 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 GDPD4Q6W3E5 623 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 USP51Q70EK9 711 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ERI1Q8IV48 349 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 C10orf111Q8N326 155 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 NETO1Q8TDF5 533 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ELMO1Q92556 727 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 TCEAL4Q96EI5 215 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 CPEB1Q9BZB8 566 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 PAIP1Q9H074 479 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 LINC00597Q9H2U6 94 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 PRM3Q9NNZ6 103 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ASAH2Q9NR71 780 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 MAFFQ9ULX9 164 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 TTC36A6NLP5 189 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ALPLP05186 524 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 THRBP10828 461 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 EEF1B2P24534 225 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ITGB8P26012 769 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 WDR5P61964 334 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 BIRC2Q13490 618 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 PON2Q15165 354 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 RNF165Q6ZSG1 346 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 KCTD8Q6ZWB6 473 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 LRRC70Q7Z2Q7 622 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 MICU2Q8IYU8 434 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ALDH16A1Q8IZ83 802 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 NAT16Q8N8M0 369 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 SDCCAG3Q96C92 435 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 FAM120BQ96EK7 910 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 APOLD1Q96LR9 279 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ZNF641Q96N77 438 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ING2Q9H160 280 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ZBP1Q9H171 429 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 KAT8Q9H7Z6 458 aaKnown RBP10.92□□□□□ -0.66
CHMP3-209ENST00000494623 POLR1BQ9H9Y6 1135 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 CXorf21Q9HAI6 301 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 LTB4R2Q9NPC1 389 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 ASIC5Q9NY37 505 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 KLHL42Q9P2K6 505 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 DNAJB9Q9UBS3 223 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 CIDEBQ9UHD4 219 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 CDC14AQ9UNH5 594 aa10.92□□□□□ -0.66
CHMP3-209ENST00000494623 PRRC2BQ5JSZ5 2229 aaKnown RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 IGLV3-16A0A075B6K0 115 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 TRIM64CA6NLI5 447 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 OR2AG2A6NM03 316 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 H0YAE9 185 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 NUAK1O60285 661 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PRAMEF4O60810 478 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CREG1O75629 220 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PRSS23O95084 383 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SCELO95171 688 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CTSAP10619 480 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PABPC1P11940 636 aaKnown RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CYP2A7P20853 494 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SHMT2P34897 504 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CDKN2CP42773 168 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 RECQLP46063 649 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 POLR2LP62875 67 aaKnown RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CTBSQ01459 385 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 ABRQ12979 859 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 NEDD8Q15843 81 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 POM121L1PQ3SYA9 428 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CCNYL2Q5T2Q4 361 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PRAMEF9Q5VWM5 478 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 LILRA6Q6PI73 481 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CCDC149Q6ZUS6 474 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 Q6ZVL8 140 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 HSD11B1LQ7Z5J1 315 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 GALNT13Q8IUC8 556 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 TCAIMQ8N3R3 496 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 LEMD2Q8NC56 503 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 OR2A12Q8NGT7 310 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 MCOLN3Q8TDD5 553 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 ADAMTS16Q8TE57 1224 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SORCS1Q8WY21 1168 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 ISOC1Q96CN7 298 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 EBPLQ9BY08 206 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 KCNH6Q9H252 994 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 FAM83DQ9H4H8 585 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 GPRC5BQ9NZH0 403 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 IFT80Q9P2H3 777 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PPT2Q9UMR5 302 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SCN8AQ9UQD0 1980 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 KCNE1BA0A087WTH5 132 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 TRIM64A6NGJ6 449 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 ERN1O75460 977 aaKnown RBP10.91□□□□□ -0.66
CHMP3-209ENST00000494623 SERPINA1P01009 418 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 CDK4P11802 303 aa10.91□□□□□ -0.66
CHMP3-209ENST00000494623 PRPS2P11908 318 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms