RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 IFT80Q9P2H3 777 aaPredicted RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 NXT1Q9UKK6 140 aaKnown RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 PRSS21Q9Y6M0 314 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 NOTCH2Q04721 2471 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 TCRBV7S2A1N4TA0A589 114 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 RASGRF2O14827 1237 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 CD3EAPO15446 510 aaKnown RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 SRPX2O60687 465 aaPredicted RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 PHF2O75151 1096 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 NDUFS3O75489 264 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 DNAJB5O75953 348 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 SORBS2O94875 1100 aaKnown RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 SLCO2B1O94956 709 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PRSS56P0CW18 603 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PVRP15151 417 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 NR1D1P20393 614 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 CD9P21926 228 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 AOAHP28039 575 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PKLRP30613 574 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 CCR7P32248 378 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 SOX8P57073 446 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 ESPL1Q14674 2120 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 GRM7Q14831 915 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 BRD3Q15059 726 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 CYP2A13Q16696 494 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 FAM214AQ32MH5 1076 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PTCHD3Q3KNS1 767 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 FHL5Q5TD97 284 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 MEI1Q5TIA1 1274 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 IRAK1BP1Q5VVH5 260 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 MLIPQ5VWP3 458 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 CPZQ66K79 652 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PTRHD1Q6GMV3 140 aaKnown RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 GSTA5Q7RTV2 222 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 OTOAQ7RTW8 1153 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 DNAJC22Q8N4W6 341 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 ZBTB2Q8N680 514 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 TTC29Q8NA56 475 aaPredicted RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 TRIM58Q8NG06 486 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 RNF31Q96EP0 1072 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 GBP5Q96PP8 586 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 RUFY1Q96T51 708 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 TCF12Q99081 682 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 WDR54Q9H977 334 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 CUEDC1Q9NWM3 386 aaPredicted RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 UTP6Q9NYH9 597 aaKnown RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 EURLQ9NYK6 297 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 SLC39A10Q9ULF5 831 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 GUCA1BQ9UMX6 200 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PLAAQ9Y263 795 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 PTRH2Q9Y3E5 179 aaKnown RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 FAM169AQ9Y6X4 670 aa8.43□□□□□ -1.06
NUP50-217ENST00000491860 SPTBN1Q01082 2364 aaKnown RBP8.43□□□□□ -1.06
NUP50-217ENST00000491860 TNRC6AQ8NDV7 1962 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 SNRNP200O75643 2136 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 A0A1B0GX78 115 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 OR51F1A6NGY5 319 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ZNF839A8K0R7 811 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 H3BMH7 237 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 K7EM74 188 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ZNF185O15231 689 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 OR1I1O60431 355 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 KLF7O75840 302 aaPredicted RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 ONECUT2O95948 504 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ESR1P03372 595 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 PDGFAP04085 211 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 CCDC175P0C221 793 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 CBSLP0DN79 551 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 PAMP19021 973 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 TPSB2P20231 275 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ATP5DP30049 168 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 OTX2P32243 289 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 CBSP35520 551 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 HSD17B2P37059 387 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 GABRA4P48169 554 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 MLLT10P55197 1068 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ADARP55265 1226 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 BASP1P80723 227 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 CHAF1BQ13112 559 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 AIMP2Q13155 320 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 SNX1Q13596 522 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ATP1A4Q13733 1029 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 MYBPC3Q14896 1274 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 SF1Q15637 639 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 TPSAB1Q15661 275 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 LCN10Q6JVE6 187 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 JMJD6Q6NYC1 403 aaPredicted RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 LRRC8BQ6P9F7 803 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ZNF534Q76KX8 674 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 MRGPREQ86SM8 312 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 IQCKQ8N0W5 287 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 GALNT16Q8N428 558 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 FDCSPQ8NFU4 85 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 FLVCR1-AS1Q8TAF5 88 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 HMGCLL1Q8TB92 370 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 C1orf54Q8WWF1 131 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 KLHL25Q9H0H3 589 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms