RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FRG1Q14331 258 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 DLG2Q15700 870 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NPTX1Q15818 432 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NSUN5P2Q63ZY6 315 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 DHRS13Q6UX07 377 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 LRIG3Q6UXM1 1119 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RBM44Q6ZP01 1051 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 C11orf57Q6ZUT1 292 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SGMS1Q86VZ5 419 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 PEX5LQ8IYB4 626 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RASGEF1CQ8N431 466 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 BOLLQ8N9W6 283 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 WFIKKN2Q8TEU8 576 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RNF139Q8WU17 664 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CHPT1Q8WUD6 406 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RIT1Q92963 219 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 COG3Q96JB2 828 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CCM2Q9BSQ5 444 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RIBC2Q9H4K1 309 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 COQ10BQ9H8M1 238 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ANKMY1Q9P2S6 941 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 AURKCQ9UQB9 309 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 C2CD2Q9Y426 696 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 TESMINQ9Y4I5 508 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NUP188Q5SRE5 1749 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ANKRD36BQ8N2N9 1353 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 LAMB2P55268 1798 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 USP6P35125 1406 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 TJP1Q07157 1748 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ITGB4P16144 1822 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 A0A087X0K7 114 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SSX5O60225 188 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 TBX19O60806 448 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PRAMEF11O60813 436 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CSF2P04141 144 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 NEFHP12036 1026 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CPN2P22792 545 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 GSCP56915 257 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 HSPB3Q12988 150 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SF3B3Q15393 1217 aaKnown RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CNGA3Q16281 694 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 GEN1Q17RS7 908 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CCDC40Q4G0X9 1142 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 TMEM198Q66K66 360 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 KIAA1161Q6NSJ0 714 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SLC30A10Q6XR72 485 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 NOXA1Q86UR1 476 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SLC4A11Q8NBS3 891 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 TRIM58Q8NG06 486 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 OR14K1Q8NGZ2 314 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 RLN3Q8WXF3 142 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 LCORQ96JN0 433 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 RUFY1Q96T51 708 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 HNRNPABQ99729 332 aaKnown RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SEMA3CQ99985 751 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 RTP3Q9BQQ7 232 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 FICDQ9BVA6 458 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 FTHL17Q9BXU8 183 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 FAM107BQ9H098 131 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 L2HGDHQ9H9P8 463 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PIGVQ9NUD9 493 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SIRT5Q9NXA8 310 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CROTQ9UKG9 612 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SATB2Q9UPW6 733 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 MFHAS1Q9Y4C4 1052 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PMF1-BGLAPU3KQ54 211 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 UMODL1Q5DID0 1318 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SBNO1A3KN83 1393 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 A0A087WZY1 265 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 LANCL1O43813 399 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 ECE2O60344 883 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 GLCEO94923 617 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 ADCY5O95622 1261 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PTBP3O95758 552 aaKnown RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 ITGB3P05106 788 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CHRM3P20309 590 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PSMB4P28070 264 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 FCGR2BP31994 310 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PRCPP42785 496 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 RAP2BP61225 183 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 MEF2DQ14814 521 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 WDR43Q15061 677 aaKnown RBP eCLIP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 DCAF6Q58WW2 860 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CCDC183Q5T5S1 534 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 TSSK4Q6SA08 328 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 BTNL8Q6UX41 500 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 LPCAT2Q7L5N7 544 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 GPR180Q86V85 440 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 SPATA2LQ8IUW3 424 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 BEST3Q8N1M1 668 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 BCORP1Q8N888 145 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 ARL14EPQ8N8R7 260 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 NCOA7Q8NI08 942 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 C11orf24Q96F05 449 aaPredicted RBP2.84□□□□□ -1.95
UBXN4-208ENST00000490163 GPR137Q96N19 417 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PANX3Q96QZ0 392 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 ZSCAN5AQ9BUG6 496 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 CDH20Q9HBT6 801 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms