RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CD9P21926 228 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 PSMB5P28074 263 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 ITGA8P53708 1063 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 ERV3-1Q14264 604 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 KIR2DS3Q14952 304 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 KLHL38Q2WGJ6 581 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 DEFB109BQ30KR1 87 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 ARMC3Q5W041 872 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 PCGF5Q86SE9 256 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 BPHLQ86WA6 291 aaPredicted RBP11.85□□□□□ -0.51
MSH5-216ENST00000484309 ZNF843Q8N446 348 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 OR2L8Q8NGY9 312 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 GIMAP7Q8NHV1 300 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 N4BP2L2Q92802 583 aaPredicted RBP11.85□□□□□ -0.51
MSH5-216ENST00000484309 CLIP3Q96DZ5 547 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 WBP1Q96G27 269 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 FOPNLQ96NB1 174 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 FCRL4Q96PJ5 515 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 EFHD1Q9BUP0 239 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 CCDC68Q9H2F9 335 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 ACTR5Q9H9F9 607 aaPredicted RBP11.85□□□□□ -0.51
MSH5-216ENST00000484309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.85□□□□□ -0.51
MSH5-216ENST00000484309 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 CHMP2BQ9UQN3 213 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 FAM169AQ9Y6X4 670 aa11.85□□□□□ -0.51
MSH5-216ENST00000484309 CDC14CA4D256 554 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 CCDC188H7C350 402 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 HAUS5O94927 633 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 FURINP09958 794 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 ELK3P41970 407 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 CLCN7P51798 805 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 ADARP55265 1226 aaKnown RBP11.84□□□□□ -0.51
MSH5-216ENST00000484309 ITGA1P56199 1179 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 C2orf54Q08AI8 447 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 GBX1Q14549 363 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 SLC5A12Q1EHB4 618 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 PTCHD3Q3KNS1 767 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.84□□□□□ -0.51
MSH5-216ENST00000484309 LCN10Q6JVE6 187 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 TTC23LQ6PF05 361 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 BORAQ6PGQ7 559 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 OR8K5Q8NH50 307 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 DENND1AQ8TEH3 1009 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 RAD51AP1Q96B01 352 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 MED8Q96G25 268 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 NDNQ99608 321 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 GPR21Q99679 349 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 EBNA1BP2Q99848 306 aaKnown RBP11.84□□□□□ -0.51
MSH5-216ENST00000484309 WDR83Q9BRX9 315 aaKnown RBP11.84□□□□□ -0.51
MSH5-216ENST00000484309 FAM167BQ9BTA0 163 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 SLC7A5P2Q9GIP4 190 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
MSH5-216ENST00000484309 CHST8Q9H2A9 424 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 ACTL8Q9H568 366 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 LATS2Q9NRM7 1088 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 MED16Q9Y2X0 877 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 ZNF462Q96JM2 2506 aa11.84□□□□□ -0.51
MSH5-216ENST00000484309 NUP210LQ5VU65 1888 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 ARHGEF33A8MVX0 844 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 EFCAB8A8MWE9 144 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 E7EQ34 232 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 ZNF749O43361 778 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 OR2B3O76000 313 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 CASQ1P31415 396 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 GRIA3P42263 894 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 GABRA4P48169 554 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 NFKB2Q00653 900 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 TSTA3Q13630 321 aaPredicted RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 FASTKQ14296 549 aaKnown RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 MORF4L2Q15014 288 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 SF1Q15637 639 aaKnown RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 SPANXN3Q5MJ09 141 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 FAM69BQ5VUD6 431 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 HIBCHQ6NVY1 386 aaPredicted RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 SYDE1Q6ZW31 735 aaPredicted RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 ANKMY2Q8IV38 441 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 CPNE9Q8IYJ1 553 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 PDIK1LQ8N165 341 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 CALML6Q8TD86 181 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 TCTN2Q96GX1 697 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 SNF8Q96H20 258 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 RUNDC3BQ96NL0 473 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 MIPEPQ99797 713 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 TWSG1Q9GZX9 223 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 DPH5Q9H2P9 285 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 PPANQ9NQ55 473 aaKnown RBP11.83□□□□□ -0.52
MSH5-216ENST00000484309 PCMTD2Q9NV79 361 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 SERTAD3Q9UJW9 196 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 KCND3Q9UK17 655 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 SNX24Q9Y343 169 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
MSH5-216ENST00000484309 MEN1O00255 615 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 NRP2O60462 931 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms