RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RUVBL2Q9Y230 463 aaKnown RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 MRPS18BQ9Y676 258 aaKnown RBP11.47□□□□□ -0.57
HMGN1-213ENST00000482192 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 COMMD10Q9Y6G5 202 aa11.47□□□□□ -0.57
HMGN1-213ENST00000482192 MEN1O00255 615 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 FANCGO15287 622 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 CREG1O75629 220 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 OR2B3O76000 313 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 MATN4O95460 622 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 RECKO95980 971 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 HBQ1P09105 142 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 IVDP26440 423 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 RORAP35398 523 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 BDKRB1P46663 353 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 CLCN7P51798 805 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 POLE2P56282 527 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 RPS15P62841 145 aaKnown RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 DHX9Q08211 1270 aaKnown RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 ZIC1Q15915 447 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 HSP90AA5PQ58FG0 334 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 ACSBG2Q5FVE4 666 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 SPANXN3Q5MJ09 141 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 FAM199XQ6PEV8 388 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 ZNF517Q6ZMY9 492 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 HMGCLL1Q8TB92 370 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 DPH2Q9BQC3 489 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 ADNPQ9H2P0 1102 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 ACTL8Q9H568 366 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 FAM114A2Q9NRY5 505 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 INTS7Q9NVH2 962 aaKnown RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 GEMIN8Q9NWZ8 242 aaKnown RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 KLHL42Q9P2K6 505 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 GALPQ9UBC7 116 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 FBXO5Q9UKT4 447 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.46□□□□□ -0.57
HMGN1-213ENST00000482192 AP1M2Q9Y6Q5 423 aa11.46□□□□□ -0.57
HMGN1-213ENST00000482192 TTI1O43156 1089 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 ZNF749O43361 778 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 BANF1O75531 89 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 FKBP9O95302 570 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 F7P08709 466 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 MAGP20916 626 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 PTPN4P29074 926 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 GABRA4P48169 554 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 MPP1Q00013 466 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 ERV3-1Q14264 604 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 SF1Q15637 639 aaKnown RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 HIF1AQ16665 826 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 KLHL38Q2WGJ6 581 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 DEFB110Q30KQ9 67 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 DEFB109BQ30KR1 87 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 BBS9Q3SYG4 887 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 CCSMST1Q4G0I0 132 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 MSS51Q4VC12 460 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 ATP1A1-AS1Q5TC04 95 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 PRAMEF17Q5VTA0 474 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 HIBCHQ6NVY1 386 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 ZNF549Q6P9A3 640 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 NEK10Q6ZWH5 1172 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 TAX1BP1Q86VP1 789 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 DSELQ8IZU8 1212 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 C2orf73Q8N5S3 287 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 APOBEC4Q8WW27 367 aaKnown RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 SNF8Q96H20 258 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 TRIM51Q9BSJ1 452 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 CHST8Q9H2A9 424 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 AKIRIN1Q9H9L7 192 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 IARS2Q9NSE4 1012 aaKnown RBP11.45□□□□□ -0.58
HMGN1-213ENST00000482192 PCMTD2Q9NV79 361 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 PLCL2Q9UPR0 1127 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 MED16Q9Y2X0 877 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 PIKFYVEQ9Y2I7 2098 aa11.45□□□□□ -0.58
HMGN1-213ENST00000482192 MYO1CO00159 1063 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 NDC80O14777 642 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 ZSCAN9O15535 394 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 HCRTR1O43613 425 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 VPS26AO75436 327 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 PSIP1O75475 530 aaKnown RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 HAUS5O94927 633 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 SEC31AO94979 1220 aaKnown RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 CATP04040 527 aaKnown RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 RAB40ALP0C0E4 278 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 CBSLP0DN79 551 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 ERVK-10P10266 1014 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 ENO3P13929 434 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 AGXTP21549 392 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 CBSP35520 551 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 ITGA8P53708 1063 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 KCNAB2Q13303 367 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 CYP2A13Q16696 494 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 ZC3H12BQ5HYM0 836 aaKnown RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.44□□□□□ -0.58
HMGN1-213ENST00000482192 KIAA0408Q6ZU52 694 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 ZNF605Q86T29 641 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 SYVN1Q86TM6 617 aa11.44□□□□□ -0.58
HMGN1-213ENST00000482192 CNTN4Q8IWV2 1026 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms