RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GPATCH1Q9BRR8 931 aaKnown RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 GPR174Q9BXC1 333 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 MKKSQ9NPJ1 570 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 ZNRF3Q9ULT6 936 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 OR6C68A6NDL8 312 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 GLOD5A6NK44 160 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 NDUFB10O96000 172 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ITGB3P05106 788 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 H2AFB2P0C5Z0 115 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 RAB13P51153 203 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 LUMP51884 338 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 PPP5CP53041 499 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TAS2R30P59541 319 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ARSHQ5FYA8 562 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ATAD3CQ5T2N8 411 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 NT5DC3Q86UY8 548 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 KIRREL1Q96J84 757 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 CCNL2Q96S94 520 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 TRMOQ9BU70 441 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SLC6A17Q9H1V8 727 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ASF1BQ9NVP2 202 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TMEM181Q9P2C4 612 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PCDHB5Q9Y5E4 795 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 MAST1Q9Y2H9 1570 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 COL15A1P39059 1388 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PDLIM1O00151 329 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 TREHO43280 583 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 B3GALT2O43825 422 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 GMDSO60547 372 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 KNG1P01042 644 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 MATN1P21941 496 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 VAMP1P23763 118 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PBLDP30039 288 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 AIF1P55008 147 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 GRK1Q15835 563 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 SLC18A3Q16572 532 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 PGAP1Q75T13 922 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 VTCN1Q7Z7D3 282 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 HIPK1Q86Z02 1210 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 HJURPQ8NCD3 748 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 NAXEQ8NCW5 288 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 ZNF669Q96BR6 464 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 HPDLQ96IR7 371 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 GPR20Q99678 358 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 EPB41L1Q9H4G0 881 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 EVLQ9UI08 416 aaPredicted RBP5.34□□□□□ -1.55
USF3-202ENST00000478658 DKKL1Q9UK85 242 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 RNF6Q9Y252 685 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 RPS6KL1Q9Y6S9 549 aa5.34□□□□□ -1.55
USF3-202ENST00000478658 C17orf112F2Z3M2 114 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 PPP1R2P9O14990 202 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 CD247P20963 164 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 ACO1P21399 889 aaKnown RBP5.34□□□□□ -1.56
USF3-202ENST00000478658 PFKPQ01813 784 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 SP140Q13342 867 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 HABP2Q14520 560 aaPredicted RBP5.34□□□□□ -1.56
USF3-202ENST00000478658 GOLGA7BQ2TAP0 167 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 ZNF782Q6ZMW2 699 aaPredicted RBP5.34□□□□□ -1.56
USF3-202ENST00000478658 SPATA19Q7Z5L4 167 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 OR5H2Q8NGV7 314 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 ADAMTS15Q8TE58 950 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 WRNIP1Q96S55 665 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 PIGQQ9BRB3 760 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 POLR1EQ9GZS1 481 aaKnown RBP5.34□□□□□ -1.56
USF3-202ENST00000478658 RSPH9Q9H1X1 276 aaPredicted RBP5.34□□□□□ -1.56
USF3-202ENST00000478658 ALG2Q9H553 416 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 ANKRA2Q9H9E1 313 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.34□□□□□ -1.56
USF3-202ENST00000478658 AIG1Q9NVV5 245 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 SEC14L3Q9UDX4 400 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 FETUBQ9UGM5 382 aa5.34□□□□□ -1.56
USF3-202ENST00000478658 SDC3O75056 442 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 EPORP19235 508 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CD79BP40259 229 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RAC1P63000 192 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SPIBQ01892 262 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 UGT3A2Q3SY77 523 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CCDC58Q4VC31 144 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PDE12Q6L8Q7 609 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 NEPROQ6NW34 567 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 DPY19L4Q7Z388 723 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 OR8J3Q8NGG0 315 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 DDX1Q92499 740 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 IP6K1Q92551 441 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 BAP1Q92560 729 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RRNAD1Q96FB5 475 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 LRFN5Q96NI6 719 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NODALQ96S42 347 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TUBA1CQ9BQE3 449 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SLC29A3Q9BZD2 475 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 EVA1AQ9H8M9 152 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SPAG4Q9NPE6 437 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 APEX2Q9UBZ4 518 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ACAD8Q9UKU7 415 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 HIF3AQ9Y2N7 669 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CPS1P31327 1500 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 OR2AG2A6NM03 316 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 BTN3A1O00481 513 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms