RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SPANXN3Q5MJ09 141 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 BEND6Q5SZJ8 279 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 LCN10Q6JVE6 187 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 MRNIPQ6NTE8 343 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 ARMC6Q6NXE6 501 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 CNSTQ6PJW8 725 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 NLGN4XQ8N0W4 816 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 NLGN4YQ8NFZ3 816 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 ZNF501Q96CX3 271 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 TRAPPC9Q96Q05 1148 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 PITPNM3Q9BZ71 974 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 TWSG1Q9GZX9 223 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 LRRC4CQ9HCJ2 640 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 FGF21Q9NSA1 209 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 IARS2Q9NSE4 1012 aaKnown RBP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 C20orf96Q9NUD7 363 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-209ENST00000477554 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 PCDHB11Q9Y5F2 797 aa17.07■□□□□ 0.32
PTPN7-209ENST00000477554 PIEZO2Q9H5I5 2752 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 DYNC1I1O14576 645 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 NRP2O60462 931 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 HAUS5O94927 633 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 ZBTB11O95625 1053 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 OGNP20774 298 aaKnown RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 GABRB3P28472 473 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 PKLRP30613 574 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 YBX1P67809 324 aaKnown RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 GBX1Q14549 363 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 KYNUQ16719 465 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 LINC00303Q3SY05 128 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 FAM69BQ5VUD6 431 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 FAM199XQ6PEV8 388 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 SPESP1Q6UW49 350 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 CDHR3Q6ZTQ4 885 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 C3orf62Q6ZUJ4 267 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 CFAP36Q96G28 342 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 TEFMQ96QE5 360 aaKnown RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 CD180Q99467 661 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 SLC12A9Q9BXP2 914 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 SOHLH2Q9NX45 425 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 LNPEPQ9UIQ6 1025 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 BTRCQ9Y297 605 aa17.06■□□□□ 0.32
PTPN7-209ENST00000477554 SPENQ96T58 3664 aaKnown RBP17.06■□□□□ 0.32
PTPN7-209ENST00000477554 NKX2-8O15522 239 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 RIPK2O43353 540 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 APOA4P06727 396 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 PSMB5P28074 263 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 PPARGP37231 505 aaPredicted RBP17.05■□□□□ 0.32
PTPN7-209ENST00000477554 CLCN7P51798 805 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 PRKAA1Q13131 559 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 FRG1Q14331 258 aaKnown RBP17.05■□□□□ 0.32
PTPN7-209ENST00000477554 LONRF1Q17RB8 773 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 ZNF449Q6P9G9 518 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 TRMT10BQ6PF06 316 aaKnown RBP17.05■□□□□ 0.32
PTPN7-209ENST00000477554 OTOAQ7RTW8 1153 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 SDCCAG8Q86SQ7 713 aaPredicted RBP17.05■□□□□ 0.32
PTPN7-209ENST00000477554 PPP1R3BQ86XI6 285 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPN7-209ENST00000477554 OR1L3Q8NH93 324 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 DENND1AQ8TEH3 1009 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 EXTL1Q92935 676 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 NDNQ99608 321 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 FAM169AQ9Y6X4 670 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 CFAP46Q8IYW2 2715 aa17.05■□□□□ 0.32
PTPN7-209ENST00000477554 PIPSLA2A3N6 862 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 TERTO14746 1132 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 C1orf105O95561 183 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ACSL3O95573 720 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 PKMP14618 531 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 CHRM3P20309 590 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 STAT5AP42229 794 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 FASTKQ14296 549 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 IL11RAQ14626 422 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 CYS1Q717R9 158 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 KCNMB4Q86W47 210 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 TMEM151BQ8IW70 566 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 EXD3Q8N9H8 876 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 SKA2Q8WVK7 121 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 UBL7Q96S82 380 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 C1GALT1Q9NS00 363 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 CROTQ9UKG9 612 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 RARRES3Q9UL19 164 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 FER1L5A0AVI2 2057 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 C2orf74A8MZ97 194 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ATXN7O15265 892 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 PIAS1O75925 651 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ESR1P03372 595 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ABHD2P08910 425 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 FURINP09958 794 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 PRKAR1AP10644 381 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 SSTR1P30872 391 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 STX2P32856 288 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 SHMT2P34897 504 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 HSD17B3P37058 310 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms