RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 IGHEP01854 428 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 TPSB2P20231 275 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 PEBP1P30086 187 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 CRADDP78560 199 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 SARNPP82979 210 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 UBAP2LQ14157 1087 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 SSPNQ14714 243 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 TPSAB1Q15661 275 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 MLIPQ5VWP3 458 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 LRRC8BQ6P9F7 803 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 OTOAQ7RTW8 1153 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 SDCCAG8Q86SQ7 713 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 KRT222Q8N1A0 295 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 OTUD6BQ8N6M0 293 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 ZNF655Q8N720 491 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 OR2L8Q8NGY9 312 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 RAD51AP1Q96B01 352 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 GBP5Q96PP8 586 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 MENTQ9BUN1 341 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 KIFC1Q9BW19 673 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 P2RY12Q9H244 342 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 EURLQ9NYK6 297 aa19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 IFT80Q9P2H3 777 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-206ENST00000474421 CCDC88CQ9P219 2028 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 SPENQ96T58 3664 aaKnown RBP19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 TTLL8A6PVC2 850 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 RASGRF2O14827 1237 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 HCRTR1O43613 425 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 CEP104O60308 925 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 DPM1O60762 260 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 KLF7O75840 302 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 CBSLP0DN79 551 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 MAGP20916 626 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 NMBRP28336 390 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 CBSP35520 551 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 FOLR3P41439 243 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 ARSFP54793 590 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 MLLT10P55197 1068 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 ZC3H12BQ5HYM0 836 aaKnown RBP19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 RNF187Q5TA31 235 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 C1orf189Q5VU69 101 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 FAM69BQ5VUD6 431 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 EFCAB3Q8N7B9 438 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 LINC01555Q8NAE3 123 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 FER1L6-AS2Q96M78 137 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 FOPNLQ96NB1 174 aa19.59■□□□□ 0.73
PDLIM4-206ENST00000474421 LRRK2Q5S007 2527 aa19.58■□□□□ 0.73
PDLIM4-206ENST00000474421 H3BMM5 538 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 PEX12O00623 359 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 ZNF185O15231 689 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 KLHL41O60662 606 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 MGAT1P26572 445 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 OTX2P32243 289 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 CCNFP41002 786 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 KCNJ1P48048 391 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 ATP1A4Q13733 1029 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 GRB7Q14451 532 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 SF1Q15637 639 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 NKAIN1Q4KMZ8 207 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 MCATQ8IVS2 390 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 LRRC8AQ8IWT6 810 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 FDCSPQ8NFU4 85 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 OR2Y1Q8NGV0 311 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 MAGEC3Q8TD91 643 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 SKA2Q8WVK7 121 aaPredicted RBP19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 TCF12Q99081 682 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 GPR83Q9NYM4 423 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 DHCR7Q9UBM7 475 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 TTC7AQ9ULT0 858 aaPredicted RBP19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 SOX13Q9UN79 622 aa19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 PTRH2Q9Y3E5 179 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-206ENST00000474421 VAPBO95292 243 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 PIM1P11309 404 aaPredicted RBP19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 PAMP19021 973 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 EIF3BP55884 814 aaKnown RBP19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 TCTE1Q5JU00 501 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 YOD1Q5VVQ6 348 aaPredicted RBP19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 MRGPREQ86SM8 312 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 ZUFSPQ96AP4 578 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 PTERQ96BW5 349 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 MFSD3Q96ES6 412 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 IL17FQ96PD4 163 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 SYBUQ9NX95 663 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 VPS9D1Q9Y2B5 631 aa19.57■□□□□ 0.72
PDLIM4-206ENST00000474421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 A6NL46 340 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 TARM1B6A8C7 271 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 VPS4BO75351 444 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 C1orf105O95561 183 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 ESR1P03372 595 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 ADARP55265 1226 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 FIGLAQ6QHK4 219 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 FAM20CQ8IXL6 584 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 FAM26EQ8N5C1 309 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 C2orf73Q8N5S3 287 aaPredicted RBP19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 CLEC1AQ8NC01 280 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 CPT1CQ8TCG5 803 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 NACC2Q96BF6 587 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 C5AR2Q9P296 337 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms