RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 BIRC5O15392 142 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 KLK8O60259 260 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PCDHGA12O60330 932 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 DLX3O60479 287 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 TRIM13O60858 407 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 WDR47O94967 919 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SIX3O95343 332 aaPredicted RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 DHRS4L1P0CG22 281 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 MTHFD2P13995 350 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 BGNP21810 368 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PKLRP30613 574 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SHMT2P34897 504 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 ARL1P40616 181 aaPredicted RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 FASLGP48023 281 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 KCNC1P48547 511 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PNLIPRP1P54315 467 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PRKAA2P54646 552 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 HERVK_113P63132 956 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 DAB2P98082 770 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 ARHGAP19Q14CB8 494 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SUZ12Q15022 739 aaKnown RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 NR0B2Q15466 257 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 CHI3L2Q15782 390 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 CSRP2Q16527 193 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 CDKL4Q5MAI5 379 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 THEMIS2Q5TEJ8 643 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PRAMEF13Q5VWM6 474 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 CAPN13Q6MZZ7 669 aaPredicted RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 AGTRAPQ6RW13 159 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 ZCCHC23Q6ZST2 131 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 TMEM26Q6ZUK4 368 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 LRRC70Q7Z2Q7 622 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 KANSL1Q7Z3B3 1105 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 RASGRP3Q8IV61 690 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 ARL14Q8N4G2 192 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 TMEM151AQ8N4L1 468 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 EID2Q8N6I1 236 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 CCNYL1Q8N7R7 359 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SNX31Q8N9S9 440 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 GPR156Q8NFN8 814 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 LRRC8CQ8TDW0 803 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 LCN9Q8WX39 176 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SH3KBP1Q96B97 665 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 RHBDF1Q96CC6 855 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SLC38A3Q99624 504 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 ERVK-6Q9BXR3 956 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SRMSQ9H3Y6 488 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 XKR8Q9H6D3 395 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 SLC40A1Q9NP59 571 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 TMEM9BQ9NQ34 198 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 CCDC177Q9NQR7 707 aaPredicted RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 DNAAF2Q9NVR5 837 aaKnown RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 OPTCQ9UBM4 332 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 ICKQ9UPZ9 632 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
CNN3-205ENST00000474409 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.12
CNN3-205ENST00000474409 GPR179Q6PRD1 2367 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 CCDC88CQ9P219 2028 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 FER1L5A0AVI2 2057 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 GSAPA4D1B5 854 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 FAM221BA6H8Z2 402 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 LILRA5A6NI73 299 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 GIPC1O14908 333 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 FLRT2O43155 660 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 SIGLEC6O43699 453 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 FOXD2O60548 495 aaPredicted RBP8.08□□□□□ -1.12
CNN3-205ENST00000474409 STK16O75716 305 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 SUPT7LO94864 414 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 RPS17P08708 135 aaKnown RBP8.08□□□□□ -1.12
CNN3-205ENST00000474409 ERGP11308 486 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
CNN3-205ENST00000474409 CCND1P24385 295 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 HSD17B2P37059 387 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 GRK6P43250 576 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 PIK3CGP48736 1102 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 AGTR2P50052 363 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 DNAJB13P59910 316 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 GUCY1A3Q02108 690 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 PRKAA1Q13131 559 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 NAE1Q13564 534 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 GRB7Q14451 532 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 RBBP7Q16576 425 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 PDK4Q16654 411 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 C18orf21Q32NC0 220 aaPredicted RBP8.08□□□□□ -1.12
CNN3-205ENST00000474409 PTCHD3Q3KNS1 767 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 ZNF678Q5SXM1 525 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.08□□□□□ -1.12
CNN3-205ENST00000474409 ARMC6Q6NXE6 501 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 AMIGO1Q86WK6 493 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 OOSP2Q86WS3 158 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 SLC35F3Q8IY50 421 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 C2orf73Q8N5S3 287 aaPredicted RBP8.08□□□□□ -1.12
CNN3-205ENST00000474409 OR4E2Q8NGC2 313 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 OR2L8Q8NGY9 312 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 OR10G6Q8NH81 332 aa8.08□□□□□ -1.12
CNN3-205ENST00000474409 RAB3IL1Q8TBN0 382 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms