RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 EBNA1BP2Q99848 306 aaKnown RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 SLC7A5P2Q9GIP4 190 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 FBXO5Q9UKT4 447 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 PCDHB3Q9Y5E6 796 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 CDC14CA4D256 554 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 E7EQ34 232 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 MEN1O00255 615 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 ZNF749O43361 778 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 KLK3P07288 261 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-205ENST00000468143 MAGP20916 626 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 GRIA3P42263 894 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 GABRA4P48169 554 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CLCN7P51798 805 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 ITGA8P53708 1063 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 ITGA1P56199 1179 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 FASTKQ14296 549 aaKnown RBP11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CRYMQ14894 314 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 SF1Q15637 639 aaKnown RBP11.13□□□□□ -0.63
CDHR3-205ENST00000468143 SLC5A12Q1EHB4 618 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 PTCHD3Q3KNS1 767 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 SYDE1Q6ZW31 735 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-205ENST00000468143 GIMAP7Q8NHV1 300 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CALML6Q8TD86 181 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 DENND1AQ8TEH3 1009 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CFAP36Q96G28 342 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 TWSG1Q9GZX9 223 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CHST8Q9H2A9 424 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CCDC68Q9H2F9 335 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 ACTR5Q9H9F9 607 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-205ENST00000468143 SYTL2Q9HCH5 934 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 LATS2Q9NRM7 1088 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 PCMTD2Q9NV79 361 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 IRAK4Q9NWZ3 460 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 SLC17A6Q9P2U8 582 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 KCND3Q9UK17 655 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
CDHR3-205ENST00000468143 CCDC188H7C350 402 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 CREG1O75629 220 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 OR2B3O76000 313 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 MATN4O95460 622 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 PSMB5P28074 263 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 CASQ1P31415 396 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 ELK3P41970 407 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 CCR10P46092 362 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 CARSP49589 748 aaKnown RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 POLE2P56282 527 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 RPS15P62841 145 aaKnown RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 MC1RQ01726 317 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 NFATC3Q12968 1075 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 GBX1Q14549 363 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 MORF4L2Q15014 288 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 SPANXN3Q5MJ09 141 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 C1orf189Q5VU69 101 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 FAM69BQ5VUD6 431 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 HIBCHQ6NVY1 386 aaPredicted RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 GPR135Q8IZ08 494 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 DSELQ8IZU8 1212 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 DNAJC22Q8N4W6 341 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 SLC22A18Q96BI1 424 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 RUNDC3BQ96NL0 473 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 NDNQ99608 321 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 GPR21Q99679 349 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 MIPEPQ99797 713 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 FAM167BQ9BTA0 163 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 ACTL8Q9H568 366 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 PLAC1Q9HBJ0 212 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 PPANQ9NQ55 473 aaKnown RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 CHMP2BQ9UQN3 213 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 FARSAQ9Y285 508 aaKnown RBP11.12□□□□□ -0.63
CDHR3-205ENST00000468143 MED16Q9Y2X0 877 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 SNX24Q9Y343 169 aa11.12□□□□□ -0.63
CDHR3-205ENST00000468143 ARHGEF33A8MVX0 844 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 EFCAB8A8MWE9 144 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 C21orf140B9A014 251 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PRICKLE3O43900 615 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 SYF2O95926 243 aaKnown RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 CBSLP0DN79 551 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 GABRB3P28472 473 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 PTPN4P29074 926 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 RORAP35398 523 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 CBSP35520 551 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 CCNFP41002 786 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 NFKB2Q00653 900 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 C2orf54Q08AI8 447 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 TSTA3Q13630 321 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 TTLL9Q3SXZ7 439 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 FCRL6Q6DN72 434 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 FIGLAQ6QHK4 219 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 SUSD1Q6UWL2 747 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 SYT10Q6XYQ8 523 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 CYHR1Q6ZMK1 362 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 ZNF605Q86T29 641 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 MCATQ8IVS2 390 aaKnown RBP11.11□□□□□ -0.63
CDHR3-205ENST00000468143 LMNTD2Q8IXW0 634 aa11.11□□□□□ -0.63
CDHR3-205ENST00000468143 CPNE9Q8IYJ1 553 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms