RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PIRTP0C851 137 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CYP4B1P13584 511 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PCSK2P16519 638 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 S100A5P33763 92 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 GGT5P36269 586 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TGFBR1P36897 503 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 LIPAP38571 399 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MAGEA11P43364 429 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 SEPHS1P49903 392 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 NKX2-5P52952 324 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 COPZ1P61923 177 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TSPY1Q01534 308 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TEKQ02763 1124 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 FPGSQ05932 587 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ELP6Q0PNE2 266 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PTGR1Q14914 329 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 GTDC1Q4AE62 458 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 FBXO43Q4G163 708 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TOR1AIP1Q5JTV8 583 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP48-206ENST00000464577 ZNF544Q6NX49 715 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 FAHD1Q6P587 224 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CCBE1Q6UXH8 406 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 DNAJC14Q6Y2X3 702 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 GDPD3Q7L5L3 318 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 GLT6D1Q7Z4J2 308 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TRIM46Q7Z4K8 759 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MILR1Q7Z6M3 343 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 LRRTM3Q86VH5 581 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CLIP4Q8N3C7 705 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 LIX1Q8N485 282 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PARP16Q8N5Y8 322 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 Q8N9G6 341 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 FAM83FQ8NEG4 500 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 GPRC5AQ8NFJ5 357 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 IL17RDQ8NFM7 739 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 OR4K2Q8NGD2 314 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 OR10T2Q8NGX3 314 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 APH1BQ8WW43 257 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PIK3R3Q92569 461 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ITCHQ96J02 903 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 OR52E6Q96RD3 313 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 BARD1Q99728 777 aaKnown RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 MGME1Q9BQP7 344 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 RHNO1Q9BSD3 238 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 GABARAPL3Q9BY60 117 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PDGFDQ9GZP0 370 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 TNKS2Q9H2K2 1166 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ABHD16BQ9H3Z7 469 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PDFQ9HBH1 243 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ZBTB20Q9HC78 741 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 PLCXD1Q9NUJ7 323 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 FAM105AQ9NUU6 356 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MIOSQ9NXC5 875 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 IL37Q9NZH6 218 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ZNF221Q9UK13 617 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PNMA8BQ9ULN7 279 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 SCML2Q9UQR0 700 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PCDHGA3Q9Y5H0 932 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 SPO11Q9Y5K1 396 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 DOCK4Q8N1I0 1966 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PLXNA3P51805 1871 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 MYO16Q9Y6X6 1858 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 BPTFQ12830 3046 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CASTOR2A6NHX0 329 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 C2orf81A6NN90 581 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 MEIS3P2A8K0S8 358 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 M0R082 166 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 HAS3O00219 553 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 DSCR3O14972 297 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 TREHO43280 583 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SCO2O43819 266 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 GJB3O75712 270 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CCNKO75909 580 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 RPLP0P05388 317 aaKnown RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 GADD45AP24522 165 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 ARL1P40616 181 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 GNPDA1P46926 289 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PXNP49023 591 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 PSEN2P49810 448 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 LIMK1P53667 647 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 CAMK2BQ13554 666 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 GTF2H3Q13889 308 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SMN1Q16637 294 aaKnown RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 USP39Q53GS9 565 aaKnown RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 FBXL22Q6P050 247 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 METTL2BQ6P1Q9 378 aaKnown RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 SBSNQ6UWP8 590 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 MSANTD1Q6ZTZ1 278 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 AHSA2Q719I0 299 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 VASH1Q7L8A9 365 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 MON1AQ86VX9 555 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SPATA2LQ8IUW3 424 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 CCDC71Q8IV32 467 aaPredicted RBP7.12□□□□□ -1.27
USP48-206ENST00000464577 CCDC103Q8IW40 242 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 PHACTR4Q8IZ21 702 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 FAM9CQ8IZT9 166 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 THEM5Q8N1Q8 247 aa7.12□□□□□ -1.27
USP48-206ENST00000464577 SLC16A10Q8TF71 515 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms