RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 GTF2H3Q13889 308 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 TLR1Q15399 786 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 CNPY1Q3B7I2 92 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 SPATS1Q496A3 300 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 THEMIS2Q5TEJ8 643 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 NEK5Q6P3R8 708 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 PARM1Q6UWI2 310 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 GALNT13Q8IUC8 556 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 CCDC138Q96M89 665 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 SLC39A3Q9BRY0 314 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 EFHD1Q9BUP0 239 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 ZNF696Q9H7X3 374 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 COPS7BQ9H9Q2 264 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 TRIM39Q9HCM9 518 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 ZDHHC4Q9NPG8 344 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 ASIC5Q9NY37 505 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 ZNHIT2Q9UHR6 403 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 SLC22A14Q9Y267 594 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 STON1Q9Y6Q2 735 aa21.17■□□□□ 0.98
PDLIM2-216ENST00000464275 KCNE1BA0A087WTH5 132 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ASPDHA6ND91 283 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 K7ESM1 405 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 PBLDP30039 288 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 GSTT1P30711 240 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 POLE2P56282 527 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 PFN3P60673 137 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 NFYCQ13952 458 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 CPSF6Q16630 551 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ZNF658BQ4V348 819 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 SGO1Q5FBB7 561 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 KLHDC8AQ8IYD2 350 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 RGL4Q8IZJ4 473 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 TMEM102Q8N9M5 508 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 FGF14Q92915 247 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 VPS33AQ96AX1 596 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 PYCR2Q96C36 320 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ZNF514Q96K75 400 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 OR2AG1Q9H205 316 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 LRTM1Q9HBL6 345 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 PADI4Q9UM07 663 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 AP4B1Q9Y6B7 739 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ANTXRLA6NF34 631 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 LILRB5O75023 590 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 NPPAP01160 153 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 CCR3P51677 355 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ENPP2Q13822 863 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 LILRA3Q8N6C8 439 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 TRMT61BQ9BVS5 477 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 MRPS26Q9BYN8 205 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ATG10Q9H0Y0 220 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 S1PR5Q9H228 398 aa21.16■□□□□ 0.98
PDLIM2-216ENST00000464275 ANKRD28O15084 1053 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 JAK1P23458 1154 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 RPL5P46777 297 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 HMGCS1Q01581 520 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 RBBP5Q15291 538 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 ADRM1Q16186 407 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 PIP5KL1Q5T9C9 394 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 TRIM74Q86UV6 250 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 SLC15A3Q8IY34 581 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 LILRA2Q8N149 483 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 SELENOMQ8WWX9 145 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 PKP2Q99959 881 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 PCDHAC1Q9H158 963 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 ACTL8Q9H568 366 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 C1orf109Q9NX04 203 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 AP4S1Q9Y587 144 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 CROCCQ5TZA2 2017 aa21.15■□□□□ 0.98
PDLIM2-216ENST00000464275 SERTM1A2A2V5 107 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 H3BM21 787 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 NME4O00746 187 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 VEGFDO43915 354 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 PDYNP01213 254 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 ITPKAP23677 461 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 SLC6A2P23975 617 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 PAGE3Q5JUK9 113 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 CACHD1Q5VU97 1274 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 GOLM1Q8NBJ4 401 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 LINC00615Q96LM1 132 aaPredicted RBP21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 RIPOR3Q96MK2 946 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 UHRF1Q96T88 793 aaPredicted RBP21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 GDF15Q99988 308 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 ELOVL6Q9H5J4 265 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 CLEC1BQ9P126 229 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 ATXN10Q9UBB4 475 aa21.14■□□□□ 0.98
PDLIM2-216ENST00000464275 ATG2BQ96BY7 2078 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 DOCK9Q9BZ29 2069 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 TCRBV3S1A0A5B6 114 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 UGDHO60701 494 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 SEC22BO75396 215 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 HSD17B1P14061 328 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 SLC7A1P30825 629 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 ATXN3P54252 364 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 CAPRIN1Q14444 709 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 TIGD2Q4W5G0 525 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 TRAPPC5Q8IUR0 188 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 FBXO15Q8NCQ5 510 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 MTFMTQ96DP5 389 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 ZBTB18Q99592 522 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms