RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.41
XRN1-203ENST00000463916 KIR2DS3Q14952 304 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 KLHL38Q2WGJ6 581 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 DEFB110Q30KQ9 67 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 TEX264Q9Y6I9 313 aa12.51□□□□□ -0.41
XRN1-203ENST00000463916 A0A0J9YY10 115 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 E5RI56 91 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 PRICKLE3O43900 615 aaPredicted RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 FURINP09958 794 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 FAM87AP0C7U9 286 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 OAS2P29728 719 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 RPL21P46778 160 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 TRMT10BQ6PF06 316 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 ZNF517Q6ZMY9 492 aaPredicted RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 C2CD4AQ8NCU7 369 aaPredicted RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 SPATA4Q8NEY3 305 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 OR8K5Q8NH50 307 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 RAD51AP1Q96B01 352 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 TCTN2Q96GX1 697 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 RUNDC3BQ96NL0 473 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 SLC39A10Q9ULF5 831 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 CHMP2BQ9UQN3 213 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 SNX24Q9Y343 169 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 EIF4E1BA6NMX2 242 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 ZNF891A8MT65 544 aaPredicted RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 ARHGEF33A8MVX0 844 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 KDM1AO60341 852 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 CPNE3O75131 537 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 KATNA1O75449 491 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 MT-ND3P03897 115 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 MAGP20916 626 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 ATP5DP30049 168 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 CASQ1P31415 396 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 YBX1P67809 324 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 FASTKQ14296 549 aaKnown RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 SLC5A12Q1EHB4 618 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 SPANXN3Q5MJ09 141 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 C16orf46Q6P387 395 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 LMNTD2Q8IXW0 634 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 ZNF843Q8N446 348 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 CALML6Q8TD86 181 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 KCNJ9Q92806 393 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 SNF8Q96H20 258 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 NDNQ99608 321 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 GPR21Q99679 349 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 SPRTNQ9H040 489 aaPredicted RBP12.5□□□□□ -0.41
XRN1-203ENST00000463916 PCDHB3Q9Y5E6 796 aa12.5□□□□□ -0.41
XRN1-203ENST00000463916 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 EFCAB8A8MWE9 144 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 MEN1O00255 615 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 PSIP1O75475 530 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 TTC4O95801 387 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 AHSGP02765 367 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 PSMB5P28074 263 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 RORAP35398 523 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 PGGT1BP53609 377 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 RPS18P62269 152 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 C2orf54Q08AI8 447 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CDC20Q12834 499 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 DNASE1L3Q13609 305 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 FAM69BQ5VUD6 431 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CYHR1Q6ZMK1 362 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 DNAJC22Q8N4W6 341 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CD200R1Q8TD46 325 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CERS2Q96G23 380 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 FOPNLQ96NB1 174 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 NAT9Q9BTE0 207 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 AARSD1Q9BTE6 412 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 EFHD1Q9BUP0 239 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CHRNA10Q9GZZ6 450 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CHST8Q9H2A9 424 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 FANCEQ9HB96 536 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 SYTL2Q9HCH5 934 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 PCMTD2Q9NV79 361 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ZC3H7BQ9UGR2 993 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 SERTAD3Q9UJW9 196 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 DHRS7Q9Y394 339 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 TLN1Q9Y490 2541 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 SEC16AO15027 2179 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 SPENQ96T58 3664 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 A0A1W2PPV9 198 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 MAP3K7O43318 606 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ZNF749O43361 778 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CYP2A7P20853 494 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 GRIA3P42263 894 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CARSP49589 748 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 ITGA1P56199 1179 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ERV3-1Q14264 604 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 SF1Q15637 639 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 HIF1AQ16665 826 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms