RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 NEDD8-MDP1E9PL57 170 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 K7ENM7 598 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 LAD1O00515 517 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 YKT6O15498 198 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 GUCY1B2O75343 617 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 TACC1O75410 805 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 REC8O95072 547 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 RTN3O95197 1032 aaPredicted RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 PLA2G4BP0C869 781 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 CYP4B1P13584 511 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 KRT10P13645 584 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 CKMT2P17540 419 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 FBLP22087 321 aaKnown RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 PRKCHP24723 683 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 YWHAQP27348 245 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 EPHA8P29322 1005 aaPredicted RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 ABCD1P33897 745 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 DDIT3P35638 169 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 PSMC2P35998 433 aaKnown RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 RPS13P62277 151 aaKnown RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 ASIC1P78348 528 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 IL9RQ01113 521 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 TBX2Q13207 712 aaPredicted RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 ZNF234Q14588 700 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 GXYLT1Q4G148 440 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 KRT79Q5XKE5 535 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 ATG16L1Q676U5 607 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 ADALQ6DHV7 355 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 ZNF66Q6ZN08 573 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 PAQR9Q6ZVX9 377 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 KLBQ86Z14 1044 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 TMTC1Q8IUR5 882 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 NUP93Q8N1F7 819 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 NAXEQ8NCW5 288 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 ZMIZ2Q8NF64 920 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 OR2T3Q8NH03 318 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 NCSTNQ92542 709 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 PRCCQ92733 491 aaPredicted RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 PPM1MQ96MI6 270 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 LGMNQ99538 433 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 SEMA3CQ99985 751 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 BBS2Q9BXC9 721 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 RAB34Q9BZG1 259 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 TRIM31Q9BZY9 425 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 TRIM4Q9C037 500 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 CLPBQ9H078 707 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 TMEM245Q9H330 911 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 ERVMER34-1Q9H9K5 563 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 PARVGQ9HBI0 331 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 BLOC1S4Q9NUP1 217 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 COMMD8Q9NX08 183 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 KLQ9UEF7 1012 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 SLC25A13Q9UJS0 675 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 SNX9Q9Y5X1 595 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 PTPRJQ12913 1337 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 ZNF106Q9H2Y7 1883 aaKnown RBP4.86□□□□□ -1.63
COPS3-204ENST00000462236 TNRC6AQ8NDV7 1962 aaKnown RBP4.86□□□□□ -1.63
COPS3-204ENST00000462236 LY6G6EA0A0G2JKS1 128 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 CDRT15L2A8MXV6 281 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 PRPF4O43172 522 aaKnown RBP eCLIP4.86□□□□□ -1.63
COPS3-204ENST00000462236 SEMA4FO95754 770 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 PYGLP06737 847 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 GIMD1P0DJR0 217 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 PEPDP12955 493 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ST6GAL1P15907 406 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ANXA13P27216 316 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 GSTM2P28161 218 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 GPD2P43304 727 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 RBP5P82980 135 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ZBTB16Q05516 673 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 STIM1Q13586 685 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 DAZAP2Q15038 168 aaPredicted RBP4.86□□□□□ -1.63
COPS3-204ENST00000462236 MDH1BQ5I0G3 518 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ISM2Q6H9L7 571 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 MTFR2Q6P444 385 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 LRIG3Q6UXM1 1119 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 TPGS1Q6ZTW0 290 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 FAM57BQ71RH2 274 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ZNF720Q7Z2F6 126 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 FAM217AQ8IXS0 508 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 LSMEM2Q8N112 164 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 CSGALNACT2Q8N6G5 542 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 NECAB1Q8N987 351 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 KCNE4Q8WWG9 221 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 FBXO32Q969P5 355 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 HVCN1Q96D96 273 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 CD180Q99467 661 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 MTMR12Q9C0I1 747 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ELOVL4Q9GZR5 314 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 LHX5Q9H2C1 402 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 POLR1BQ9H9Y6 1135 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 SGK2Q9HBY8 427 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 OSER1Q9NX31 292 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ELOVL2Q9NXB9 296 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 PTGFRNQ9P2B2 879 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 CHORDC1Q9UHD1 332 aaPredicted RBP4.86□□□□□ -1.63
COPS3-204ENST00000462236 CLEC4EQ9ULY5 219 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms