RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PITPNM3Q9BZ71 974 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 FAM117AQ9C073 453 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 ADNPQ9H2P0 1102 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 GEMIN8Q9NWZ8 242 aaKnown RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 SPHK1Q9NYA1 384 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 HEMK1Q9Y5R4 338 aaPredicted RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 NFS1Q9Y697 457 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 A0A0J9YY10 115 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 C21orf140B9A014 251 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 ATP5DP30049 168 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 CCNFP41002 786 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 ELK3P41970 407 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 MRPS25P82663 173 aaKnown RBP14.86□□□□□ -0.03
VARS-219ENST00000461328 KCNAB2Q13303 367 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 KIR2DS3Q14952 304 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 KYNUQ16719 465 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 CRTC2Q53ET0 693 aaPredicted RBP14.86□□□□□ -0.03
VARS-219ENST00000461328 ATP1A1-AS1Q5TC04 95 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 HIBCHQ6NVY1 386 aaPredicted RBP14.86□□□□□ -0.03
VARS-219ENST00000461328 SPATA4Q8NEY3 305 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 MAGEC3Q8TD91 643 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 RAD51AP1Q96B01 352 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 C16orf45Q96MC5 204 aaPredicted RBP14.86□□□□□ -0.03
VARS-219ENST00000461328 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 TRAPPC9Q96Q05 1148 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 OR2A14Q96R47 310 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 SLC7A5P2Q9GIP4 190 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 SYTL2Q9HCH5 934 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 LATS2Q9NRM7 1088 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 STARD5Q9NSY2 213 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 IRAK4Q9NWZ3 460 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 ZC3H7BQ9UGR2 993 aaKnown RBP14.86□□□□□ -0.03
VARS-219ENST00000461328 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
VARS-219ENST00000461328 TERTO14746 1132 aaKnown RBP14.85□□□□□ -0.03
VARS-219ENST00000461328 RASGRF2O14827 1237 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 C1orf105O95561 183 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 KLK3P07288 261 aaPredicted RBP14.85□□□□□ -0.03
VARS-219ENST00000461328 TPBGLP0DKB5 382 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 CYP2A7P20853 494 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 CALCOCO2Q13137 446 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 CUL1Q13616 776 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 ERV3-1Q14264 604 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 DEFB110Q30KQ9 67 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 ACSBG2Q5FVE4 666 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 PRICKLE2Q7Z3G6 844 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 MAATS1Q7Z4T9 603 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 BBOF1Q8ND07 529 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 APOBEC4Q8WW27 367 aaKnown RBP14.85□□□□□ -0.03
VARS-219ENST00000461328 KCNJ9Q92806 393 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 MR1Q95460 341 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 SLC22A18Q96BI1 424 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 CERS2Q96G23 380 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 SLC25A18Q9H1K4 315 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 DPH5Q9H2P9 285 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.85□□□□□ -0.03
VARS-219ENST00000461328 GALPQ9UBC7 116 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 PCDHGA6Q9Y5G7 932 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 COMMD10Q9Y6G5 202 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 COL6A6A6NMZ7 2263 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 ZNF462Q96JM2 2506 aa14.85□□□□□ -0.03
VARS-219ENST00000461328 CDC14CA4D256 554 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 FAM187AA6NFU0 413 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 SLC28A2O43868 658 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 VPS26AO75436 327 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 CREG1O75629 220 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 HAUS5O94927 633 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 CATP04040 527 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 MSL3P1P0C860 447 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 CD9P21926 228 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 PEBP1P30086 187 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 RPL21P46778 160 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 CARSP49589 748 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 CLCN7P51798 805 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 RPS15P62841 145 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 CKAP4Q07065 602 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 PDIA2Q13087 525 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 GPS2Q13227 327 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 SLC5A12Q1EHB4 618 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 KLHL38Q2WGJ6 581 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 PRAMEF17Q5VTA0 474 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 ZNF549Q6P9A3 640 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 FAM199XQ6PEV8 388 aaPredicted RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 CDHR3Q6ZTQ4 885 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 ANKMY2Q8IV38 441 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 IGDCC3Q8IVU1 814 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 LMNTD1Q8N9Z9 388 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 C2CD4AQ8NCU7 369 aaPredicted RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 OR2L8Q8NGY9 312 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 OR1L3Q8NH93 324 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 LRRC39Q96DD0 335 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 CLIP3Q96DZ5 547 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 TCTN2Q96GX1 697 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 NDNQ99608 321 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 GPR21Q99679 349 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 AARSD1Q9BTE6 412 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 GPR87Q9BY21 358 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 TWSG1Q9GZX9 223 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 ACTL8Q9H568 366 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 AKIRIN1Q9H9L7 192 aaPredicted RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 FAM114A2Q9NRY5 505 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms