RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FAM136AQ96C01 138 aa14.05□□□□□ -0.16
HSPG2-207ENST00000453796 TCTN2Q96GX1 697 aa14.05□□□□□ -0.16
HSPG2-207ENST00000453796 RUNDC3BQ96NL0 473 aa14.05□□□□□ -0.16
HSPG2-207ENST00000453796 RUFY1Q96T51 708 aa14.05□□□□□ -0.16
HSPG2-207ENST00000453796 EBNA1BP2Q99848 306 aaKnown RBP14.05□□□□□ -0.16
HSPG2-207ENST00000453796 C20orf96Q9NUD7 363 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-207ENST00000453796 KCND3Q9UK17 655 aa14.05□□□□□ -0.16
HSPG2-207ENST00000453796 FBXO5Q9UKT4 447 aa14.05□□□□□ -0.16
HSPG2-207ENST00000453796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
HSPG2-207ENST00000453796 MDC1Q14676 2089 aaKnown RBP14.04□□□□□ -0.16
HSPG2-207ENST00000453796 ANKRD12Q6UB98 2062 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 RECKO95980 971 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 FAM87AP0C7U9 286 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 CHRM3P20309 590 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 ITGA1P56199 1179 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 DR1Q01658 176 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 HSP90AA5PQ58FG0 334 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 ZNF385CQ66K41 422 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-207ENST00000453796 LCN10Q6JVE6 187 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 HIBCHQ6NVY1 386 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-207ENST00000453796 KCNMB4Q86W47 210 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 SPNS2Q8IVW8 549 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 FAM20CQ8IXL6 584 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 DNAJC22Q8N4W6 341 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 C2orf73Q8N5S3 287 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-207ENST00000453796 ZBTB2Q8N680 514 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 GSDMBQ8TAX9 411 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 KCNJ9Q92806 393 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 WDR83Q9BRX9 315 aaKnown RBP14.04□□□□□ -0.16
HSPG2-207ENST00000453796 TRIM51Q9BSJ1 452 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 RAB11FIP5Q9BXF6 653 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 PCMTD2Q9NV79 361 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 KLHL42Q9P2K6 505 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 RNF14Q9UBS8 474 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 SERTAD3Q9UJW9 196 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
HSPG2-207ENST00000453796 A0A1W2PPV9 198 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 E5RI56 91 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 E7EQ34 232 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 MEN1O00255 615 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 TTI1O43156 1089 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 PSIP1O75475 530 aaKnown RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 CREG1O75629 220 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 HAUS5O94927 633 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 TTC4O95801 387 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 CAPN1P07384 714 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 CTSBP07858 339 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 ERGP11308 486 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 MAGP20916 626 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 CCNFP41002 786 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 PAFAH1B1P43034 410 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 MPP1Q00013 466 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 DEFB110Q30KQ9 67 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 C16orf46Q6P387 395 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 TTC23LQ6PF05 361 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 CNSTQ6PJW8 725 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 NEK10Q6ZWH5 1172 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 CNTN4Q8IWV2 1026 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 C2CD4AQ8NCU7 369 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 PWWP2AQ96N64 755 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 FOPNLQ96NB1 174 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 ARHGAP9Q9BRR9 750 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 NAT9Q9BTE0 207 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 GPR87Q9BY21 358 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 ACTL8Q9H568 366 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 ACTR5Q9H9F9 607 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 IARS2Q9NSE4 1012 aaKnown RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 GEMIN8Q9NWZ8 242 aaKnown RBP14.03□□□□□ -0.16
HSPG2-207ENST00000453796 SPATA7Q9P0W8 599 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 SLC39A10Q9ULF5 831 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 DHRS7Q9Y394 339 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 COMMD10Q9Y6G5 202 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 MED13Q9UHV7 2174 aa14.03□□□□□ -0.16
HSPG2-207ENST00000453796 ARHGEF33A8MVX0 844 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 SMAPO00193 183 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 MAP3K7O43318 606 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 ZNF749O43361 778 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 KATNA1O75449 491 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 SEC31AO94979 1220 aaKnown RBP14.02□□□□□ -0.17
HSPG2-207ENST00000453796 FKBP9O95302 570 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 CYP2A7P20853 494 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 GABRB3P28472 473 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 PTPN4P29074 926 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 GCGRP47871 477 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 ITGA8P53708 1063 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 RPS18P62269 152 aaKnown RBP14.02□□□□□ -0.17
HSPG2-207ENST00000453796 TIAL1Q01085 375 aaKnown RBP eCLIP14.02□□□□□ -0.17
HSPG2-207ENST00000453796 ERV3-1Q14264 604 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 CYP2A13Q16696 494 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 BBS9Q3SYG4 887 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 SPANXN3Q5MJ09 141 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 FCRL6Q6DN72 434 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 FAM198BQ6UWH4 519 aa14.02□□□□□ -0.17
HSPG2-207ENST00000453796 CYHR1Q6ZMK1 362 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms