RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 C17orf53Q8N3J3 647 aaPredicted RBP28.96■■■□□ 2.23
CCDC117-206ENST00000453543 MR1Q95460 341 aa28.96■■■□□ 2.23
CCDC117-206ENST00000453543 RAD51AP1Q96B01 352 aa28.96■■■□□ 2.23
CCDC117-206ENST00000453543 SERTAD3Q9UJW9 196 aa28.96■■■□□ 2.23
CCDC117-206ENST00000453543 KLHL20Q9Y2M5 609 aa28.96■■■□□ 2.23
CCDC117-206ENST00000453543 MED16Q9Y2X0 877 aa28.96■■■□□ 2.23
CCDC117-206ENST00000453543 C21orf140B9A014 251 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 FURINP09958 794 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 ITGA1P56199 1179 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 MPP1Q00013 466 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 CRTC2Q53ET0 693 aaPredicted RBP28.95■■■□□ 2.22
CCDC117-206ENST00000453543 KCNMB4Q86W47 210 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 GIMAP7Q8NHV1 300 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 CALML6Q8TD86 181 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 PWWP2AQ96N64 755 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 FOPNLQ96NB1 174 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 RUNDC3BQ96NL0 473 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 ACTR5Q9H9F9 607 aaPredicted RBP28.95■■■□□ 2.22
CCDC117-206ENST00000453543 FBXO5Q9UKT4 447 aa28.95■■■□□ 2.22
CCDC117-206ENST00000453543 ZNF462Q96JM2 2506 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 TTI1O43156 1089 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 MATN4O95460 622 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 RORAP35398 523 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 PAFAH1B1P43034 410 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 CLCN7P51798 805 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 ERV3-1Q14264 604 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 DEFB109BQ30KR1 87 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 BBS9Q3SYG4 887 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 LCN10Q6JVE6 187 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 ZNF517Q6ZMY9 492 aaPredicted RBP28.94■■■□□ 2.22
CCDC117-206ENST00000453543 IGDCC3Q8IVU1 814 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 LMNTD2Q8IXW0 634 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 DENND1AQ8TEH3 1009 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 CLIP3Q96DZ5 547 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 LRFN5Q96NI6 719 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 EBNA1BP2Q99848 306 aaKnown RBP28.94■■■□□ 2.22
CCDC117-206ENST00000453543 FAM167BQ9BTA0 163 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 RAB11FIP5Q9BXF6 653 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 CHRNA10Q9GZZ6 450 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 CHST8Q9H2A9 424 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 ACTL8Q9H568 366 aa28.94■■■□□ 2.22
CCDC117-206ENST00000453543 IARS2Q9NSE4 1012 aaKnown RBP28.94■■■□□ 2.22
CCDC117-206ENST00000453543 E7EQ34 232 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 CCDC188H7C350 402 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 CTSBP07858 339 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 ERVK-10P10266 1014 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 MAGP20916 626 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 CCNFP41002 786 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 RPS18P62269 152 aaKnown RBP28.93■■■□□ 2.22
CCDC117-206ENST00000453543 MORF4L2Q15014 288 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 KLHL38Q2WGJ6 581 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 DSELQ8IZU8 1212 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 N4BP2L2Q92802 583 aaPredicted RBP28.93■■■□□ 2.22
CCDC117-206ENST00000453543 SLC22A18Q96BI1 424 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 CCDC68Q9H2F9 335 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 PCMTD2Q9NV79 361 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 MRFAP1Q9Y605 127 aa28.93■■■□□ 2.22
CCDC117-206ENST00000453543 TLN1Q9Y490 2541 aaKnown RBP28.93■■■□□ 2.22
CCDC117-206ENST00000453543 H3BMH7 237 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 MEN1O00255 615 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 ZNF749O43361 778 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 CREG1O75629 220 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 HAUS5O94927 633 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 CCR10P46092 362 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 POLE2P56282 527 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.92■■■□□ 2.22
CCDC117-206ENST00000453543 DNAJC22Q8N4W6 341 aa28.92■■■□□ 2.22
CCDC117-206ENST00000453543 SPRTNQ9H040 489 aaPredicted RBP28.92■■■□□ 2.22
CCDC117-206ENST00000453543 ARHGEF33A8MVX0 844 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 PRICKLE3O43900 615 aaPredicted RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 TTC4O95801 387 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 KLK3P07288 261 aaPredicted RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 CUL1Q13616 776 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 SPANXN3Q5MJ09 141 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 HP1BP3Q5SSJ5 553 aaPredicted RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 HIBCHQ6NVY1 386 aaPredicted RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 GPR135Q8IZ08 494 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 KCNJ9Q92806 393 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 WDR83Q9BRX9 315 aaKnown RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 TRIM31Q9BZY9 425 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 PLAC1Q9HBJ0 212 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 GEMIN8Q9NWZ8 242 aaKnown RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 RNF14Q9UBS8 474 aa28.91■■■□□ 2.22
CCDC117-206ENST00000453543 GCN1Q92616 2671 aaKnown RBP28.91■■■□□ 2.22
CCDC117-206ENST00000453543 CDC14CA4D256 554 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 OR2B3O76000 313 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 PSMB5P28074 263 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 PTPN4P29074 926 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 ITGA8P53708 1063 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 SF1Q15637 639 aaKnown RBP28.9■■■□□ 2.22
CCDC117-206ENST00000453543 PTCHD3Q3KNS1 767 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 SYTL1Q8IYJ3 562 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 C2CD4AQ8NCU7 369 aaPredicted RBP28.9■■■□□ 2.22
CCDC117-206ENST00000453543 MAGEC3Q8TD91 643 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 KRT12Q99456 494 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 GPR21Q99679 349 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 GPR87Q9BY21 358 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 SLC7A5P2Q9GIP4 190 aa28.9■■■□□ 2.22
CCDC117-206ENST00000453543 CAMSAP3Q9P1Y5 1249 aaPredicted RBP28.9■■■□□ 2.22
CCDC117-206ENST00000453543 PSIP1O75475 530 aaKnown RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms