RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RPS3P23396 243 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHD3-206ENST00000452447 PEBP1P30086 187 aaKnown RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 PTGIRP43119 386 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 SF1Q15637 639 aaKnown RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 RNF187Q5TA31 235 aaPredicted RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 FAM69BQ5VUD6 431 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 MLIPQ5VWP3 458 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 CPZQ66K79 652 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 RHBDD2Q6NTF9 364 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 CASC4Q6P4E1 433 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 TLDC1Q6P9B6 456 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 TAX1BP1Q86VP1 789 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 RAB42Q8N4Z0 105 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 ZNF655Q8N720 491 aaPredicted RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 MAGOHBQ96A72 148 aaKnown RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 RAD51AP1Q96B01 352 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 PBKQ96KB5 322 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 NDC1Q9BTX1 674 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 INTS7Q9NVH2 962 aaKnown RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 GPN3Q9UHW5 284 aaPredicted RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 SOX13Q9UN79 622 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 SRPK3Q9UPE1 567 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 PLCL2Q9UPR0 1127 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 JRKLQ9Y4A0 524 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 TCRBV7S3A2A0A539 114 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 RASGRF2O14827 1237 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 HCRTR1O43613 425 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 KRT14P02533 472 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 CD63P08962 238 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 CBSLP0DN79 551 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 MAGP20916 626 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 ARNTP27540 789 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 FMO4P31512 558 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 CBSP35520 551 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 GABRA4P48169 554 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 PGDP52209 483 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 DCDP81605 110 aaKnown RBP12.41□□□□□ -0.42
CHD3-206ENST00000452447 COLEC12Q5KU26 742 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 C1orf189Q5VU69 101 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 RAB43Q86YS6 212 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 FAM20CQ8IXL6 584 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 DNAJC22Q8N4W6 341 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 TMEM102Q8N9M5 508 aaPredicted RBP12.41□□□□□ -0.42
CHD3-206ENST00000452447 LINC01555Q8NAE3 123 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 OR2L8Q8NGY9 312 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 PROKR1Q8TCW9 393 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 MAGEC3Q8TD91 643 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 ADAMTS17Q8TE56 1095 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 IL17FQ96PD4 163 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 TCF12Q99081 682 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 NAP1L3Q99457 506 aaPredicted RBP12.41□□□□□ -0.42
CHD3-206ENST00000452447 MENTQ9BUN1 341 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 RAB11FIP5Q9BXF6 653 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 SAMD15Q9P1V8 674 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 PCDHGA9Q9Y5G4 932 aaKnown RBP12.41□□□□□ -0.42
CHD3-206ENST00000452447 HEATR5BQ9P2D3 2071 aa12.41□□□□□ -0.42
CHD3-206ENST00000452447 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
CHD3-206ENST00000452447 H3BMM5 538 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 AVILO75366 819 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 C1orf105O95561 183 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 ALAS2P22557 587 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 RRADP55042 308 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 GRB7Q14451 532 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 KCNJ11Q14654 390 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 IGFBP7Q16270 282 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 ZC3H12BQ5HYM0 836 aaKnown RBP12.4□□□□□ -0.42
CHD3-206ENST00000452447 ARMC3Q5W041 872 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 ZNF385CQ66K41 422 aaPredicted RBP12.4□□□□□ -0.42
CHD3-206ENST00000452447 KIAA0930Q6ICG6 404 aaPredicted RBP12.4□□□□□ -0.42
CHD3-206ENST00000452447 MED25Q71SY5 747 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 DENND1AQ8TEH3 1009 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 BIRC8Q96P09 236 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 EURLQ9NYK6 297 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 IFT80Q9P2H3 777 aaPredicted RBP12.4□□□□□ -0.42
CHD3-206ENST00000452447 DHCR7Q9UBM7 475 aaKnown RBP12.4□□□□□ -0.42
CHD3-206ENST00000452447 NDOR1Q9UHB4 597 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 KLHL20Q9Y2M5 609 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 CRYL1Q9Y2S2 319 aa12.4□□□□□ -0.42
CHD3-206ENST00000452447 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 E5RI56 91 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 H3BMH7 237 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 ESR1P03372 595 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 PDGFAP04085 211 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 CTSBP07858 339 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 CHRM3P20309 590 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 OTX2P32243 289 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 CCNFP41002 786 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 MAGEA6P43360 314 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 FOXK1P85037 733 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 SSPNQ14714 243 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 SLC9A5Q14940 896 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 TYSND1Q2T9J0 566 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 CTSL3PQ5NE16 218 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 CNSTQ6PJW8 725 aa12.39□□□□□ -0.43
CHD3-206ENST00000452447 CCDC137Q6PK04 289 aaKnown RBP12.39□□□□□ -0.43
CHD3-206ENST00000452447 MCATQ8IVS2 390 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms