RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RASGRP3Q8IV61 690 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 RIBC1Q8N443 379 aaPredicted RBP16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 HM13Q8TCT9 377 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 SLC44A1Q8WWI5 657 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 KLHL6Q8WZ60 621 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 MRRFQ96E11 262 aaKnown RBP16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 PAFAH2Q99487 392 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 MAP3K3Q99759 626 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 ARHGAP9Q9BRR9 750 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 CCM2Q9BSQ5 444 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 SLC12A9Q9BXP2 914 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 RAB33BQ9H082 229 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 HRASLS2Q9NWW9 162 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 GNPTGQ9UJJ9 305 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 ZNF180Q9UJW8 692 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 PRSS21Q9Y6M0 314 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 PIEZO2Q9H5I5 2752 aa16.56■□□□□ 0.24
PRPF40A-204ENST00000450303 IGLV3-16A0A075B6K0 115 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 H3BMM5 538 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 RASGRF2O14827 1237 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 KRT38O76015 456 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 HAUS5O94927 633 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 AP2A2O94973 939 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 C1QAP02745 245 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 AHSGP02765 367 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 SHBGP04278 402 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 OR56A5P0C7T3 313 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 RPS3P23396 243 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■□□□□ 11.1
PRPF40A-204ENST00000450303 MAP4P27816 1152 aaKnown RBP16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 PDHA2P29803 388 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 PREPP48147 710 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 ADARP55265 1226 aaKnown RBP16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 KCNAB1Q14722 419 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 EFTUD2Q15029 972 aaKnown RBP eCLIP16.55■□□□□ 0.241e-9■■■□□ 16.9
PRPF40A-204ENST00000450303 PTRHD1Q6GMV3 140 aaKnown RBP16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 KLHL35Q6PF15 583 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 PHC3Q8NDX5 983 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 OR4E2Q8NGC2 313 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 FERD3LQ96RJ6 166 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 RBBP8Q99708 897 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 NRTNQ99748 197 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 ULBP3Q9BZM4 244 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 RHOJQ9H4E5 214 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 COG4Q9H9E3 785 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 GPN2Q9H9Y4 310 aaPredicted RBP16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 PSMC3IPQ9P2W1 217 aaPredicted RBP16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 CRYL1Q9Y2S2 319 aa16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 TMEM184BQ9Y519 407 aaPredicted RBP16.55■□□□□ 0.24
PRPF40A-204ENST00000450303 KALRNO60229 2985 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 IQANK1A0A1B0GTG1 560 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 C17orf113A0A1B0GUU1 675 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 KLHL33A6NCF5 533 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 OR5K3A6NET4 321 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 NKX2-8O15522 239 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 CDH16O75309 829 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 PIAS1O75925 651 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 KIAA0754O94854 1291 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 DLGAP3O95886 979 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 ESR1P03372 595 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 FAM87AP0C7U9 286 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 FOLR1P15328 257 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 NELFEP18615 380 aaKnown RBP16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 FMO4P31512 558 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 GYS2P54840 703 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 AGBL2Q5U5Z8 902 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 ARMC6Q6NXE6 501 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 CNSTQ6PJW8 725 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 ADGRD1Q6QNK2 874 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 OOSP2Q86WS3 158 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 TDRPQ86YL5 185 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 SIDT2Q8NBJ9 832 aaKnown RBP16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 GALNT6Q8NCL4 622 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 LPGAT1Q92604 370 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 MED8Q96G25 268 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 ATP6V1G3Q96LB4 118 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 PPM1MQ96MI6 270 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 PANX3Q96QZ0 392 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 TMEM109Q9BVC6 243 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 KIR3DX1Q9H7L2 352 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 SLC17A6Q9P2U8 582 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 IL17BQ9UHF5 180 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 PSAT1Q9Y617 370 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 COLEC10Q9Y6Z7 277 aa16.54■□□□□ 0.24
PRPF40A-204ENST00000450303 TLDC2A0PJX2 215 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 PKMP14618 531 aaKnown RBP16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 POLR2CP19387 275 aaPredicted RBP16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 ARL4DP49703 201 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 SLC12A2P55011 1212 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 RASA2Q15283 850 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 ZNF658BQ4V348 819 aaPredicted RBP16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 FAM45BPQ6NSW5 357 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 UGT3A1Q6NUS8 523 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 NAPRTQ6XQN6 538 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 ZNF605Q86T29 641 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 ZC3HC1Q86WB0 502 aaKnown RBP16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 OR2W6PQ8NHA6 318 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 FAM45AQ8TCE6 357 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 ZFPM2Q8WW38 1151 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 KIAA1143Q96AT1 154 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms