RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 KRT6CP48668 564 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 MRPL19P49406 292 aaKnown RBP13.85□□□□□ -0.19
USP39-207ENST00000450066 ERVK-8P63133 956 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 MAPRE2Q15555 327 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 C6orf136Q5SQH8 315 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 ARHGAP24Q8N264 748 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 RAD51AP1Q96B01 352 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 SDR39U1Q9NRG7 319 aaPredicted RBP13.85□□□□□ -0.19
USP39-207ENST00000450066 CIDEBQ9UHD4 219 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 SUFUQ9UMX1 484 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 CCL27Q9Y4X3 112 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 KANSL1LA0AUZ9 987 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 PRR19A6NJB7 356 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 MEI4A8MW99 385 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 SLC28A1O00337 649 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 LSM1O15116 133 aaKnown RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 RGS14O43566 566 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 SLC35G4P0C7Q5 338 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 GPX3P22352 226 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 KELP23276 732 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 PGM1P36871 562 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CLDN2P57739 230 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 ZP2Q05996 745 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 GRIK2Q13002 908 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CUL3Q13618 768 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 GAS6Q14393 721 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CPSF6Q16630 551 aaKnown RBP eCLIP13.84□□□□□ -0.19
USP39-207ENST00000450066 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 AGKQ53H12 422 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 LIPJQ5W064 366 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 ANO7Q6IWH7 933 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CYB5D1Q6P9G0 228 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 DCUN1D3Q8IWE4 304 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 SYTL1Q8IYJ3 562 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 MIER2Q8N344 545 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 SFRP1Q8N474 314 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 OR5K2Q8NHB8 316 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 BMFQ96LC9 184 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 OR4K3Q96R72 315 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 NELL2Q99435 816 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 ZNF490Q9ULM2 529 aaPredicted RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 SNX6Q9UNH7 406 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 PSMD13Q9UNM6 376 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 PRAMEF4O60810 478 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 OXTRP30559 389 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 AKT2P31751 481 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CCR5P51681 352 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 SLC25A3Q00325 362 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CHIT1Q13231 466 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 NFATC4Q14934 902 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 PRAMEF9Q5VWM5 478 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CAPRIN2Q6IMN6 1127 aaKnown RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 CAPN13Q6MZZ7 669 aaPredicted RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 PPFIBP2Q8ND30 876 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 TSTD1Q8NFU3 115 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 OR5AR1Q8NGP9 310 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 HBEGFQ99075 208 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 FGF22Q9HCT0 170 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 MRPL40Q9NQ50 206 aaKnown RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 FARSBQ9NSD9 589 aaKnown RBP13.84□□□□□ -0.19
USP39-207ENST00000450066 AIG1Q9NVV5 245 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 C2orf42Q9NWW7 574 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 GPRC5BQ9NZH0 403 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 CCDC167Q9P0B6 97 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 FBXL21Q9UKT6 434 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 GPR45Q9Y5Y3 372 aa13.84□□□□□ -0.19
USP39-207ENST00000450066 PRSS38A1L453 326 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 E7ENX8 843 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 MGRN1O60291 552 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 APBB3O95704 486 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 JUPP14923 745 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 GNAZP19086 355 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 RPL10P27635 214 aaKnown RBP13.83□□□□□ -0.2
USP39-207ENST00000450066 HTR1BP28222 390 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 HALP42357 657 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 CLCNKAP51800 687 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 DIO3P55073 304 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 YPEL5P62699 121 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 IRF8Q02556 426 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TAP2Q03519 686 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 EMX2Q04743 252 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 STX5Q13190 355 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 RPS6KA2Q15349 733 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 NR6A1Q15406 480 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 SMU1Q2TAY7 513 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 LRRC56Q8IYG6 542 aaPredicted RBP13.83□□□□□ -0.2
USP39-207ENST00000450066 FNDC5Q8NAU1 212 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 PHC3Q8NDX5 983 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TOE1Q96GM8 510 aaKnown RBP13.83□□□□□ -0.2
USP39-207ENST00000450066 PPP3R2Q96LZ3 170 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 SLC25A23Q9BV35 468 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 SGPP1Q9BX95 441 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 ELOVL6Q9H5J4 265 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 EFCAB1Q9HAE3 211 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 MOSPD1Q9UJG1 213 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms