RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 DAOP14920 347 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 VCLP18206 1134 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TKTP29401 623 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ASCL1P50553 236 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ART1P52961 327 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 GFPT1Q06210 699 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ILF3Q12906 894 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 MAD2L1Q13257 205 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SNTA1Q13424 505 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 NR1D2Q14995 579 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 IQCCQ4KMZ1 466 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 HSP90AA5PQ58FG0 334 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 C12orf60Q5U649 245 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 DUS1LQ6P1R4 473 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 FAM122CQ6P4D5 195 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 BRAT1Q6PJG6 821 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRSS57Q6UWY2 283 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 OLFM4Q6UX06 510 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 CCNI2Q6ZMN8 369 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SIAH3Q8IW03 269 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 CCDC83Q8IWF9 413 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TBC1D21Q8IYX1 336 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SMRP1Q8NCR6 262 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 NCOA7Q8NI08 942 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 URGCPQ8TCY9 931 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 RAD54LQ92698 747 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TANKQ92844 425 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 APBB2Q92870 758 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TAAR8Q969N4 342 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLAMF9Q96A28 289 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SNRNP40Q96DI7 357 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 RTP4Q96DX8 246 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ERLEC1Q96DZ1 483 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 EEF2KMTQ96G04 330 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 C3orf30Q96M34 536 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF385AQ96PM9 386 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 OR1F2PQ96R84 312 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 CPNE1Q99829 537 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 GTPBP2Q9BX10 602 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 MOV10L1Q9BXT6 1211 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 DDX31Q9H8H2 851 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 AKIRIN1Q9H9L7 192 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TBC1D17Q9HA65 648 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM161AQ9NX61 479 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 P4HTMQ9NXG6 502 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 DPP3Q9NY33 737 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPG21Q9NZD8 308 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 STK26Q9P289 416 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 GMEB2Q9UKD1 530 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 DUSP12Q9UNI6 340 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TDRKHQ9Y2W6 561 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ATP8B3O60423 1300 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 A0A1B0GUV1 79 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 C13orf42A0A1B0GVH6 325 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 FEZF1A0PJY2 475 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 SSX4O60224 188 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF217O75362 1048 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 NME6O75414 186 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 IFNB1P01574 187 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ABHD2P08910 425 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 PLA2G4BP0C869 781 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 GHRP10912 638 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 FGF3P11487 239 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 S1PR1P21453 382 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 UGT1A1P22309 533 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 AHCYP23526 432 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 HRH2P25021 359 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 CCND3P30281 292 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 PEX5P50542 639 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 TNK1Q13470 666 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 SCN5AQ14524 2016 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 INAQ16352 499 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 KIF19Q2TAC6 998 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 LRRC73Q5JTD7 316 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZDHHC20Q5W0Z9 365 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ALS2CLQ60I27 953 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 NOTUMQ6P988 496 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZCCHC12Q6PEW1 402 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ENPP7Q6UWV6 458 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ISLR2Q6UXK2 745 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 SATL1Q86VE3 508 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF34Q8IZ26 560 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 C1orf87Q8N0U7 546 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 LRRC8CQ8TDW0 803 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ORAI1Q96D31 301 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 MTBPQ96DY7 904 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 VPS39Q96JC1 886 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 ADGRG7Q96K78 797 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 KLHL5Q96PQ7 755 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 PCYT2Q99447 389 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 FEVQ99581 238 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 GFI1Q99684 422 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 NYXQ9GZU5 481 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 SRD5A3Q9H8P0 318 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 EBF2Q9HAK2 575 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 RNPEPL1Q9HAU8 725 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 KLHL1Q9NR64 748 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms