RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 GOLGA8TH3BQL2 631 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 CEACAM4O75871 244 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 VAPBO95292 243 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 APOA4P06727 396 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 MAGP20916 626 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 CD9P21926 228 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 PPARGP37231 505 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 FOXK1P85037 733 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 NCF4Q15080 339 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 TRIP13Q15645 432 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 IGFBP7Q16270 282 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 CYP1B1Q16678 543 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 KIAA0930Q6ICG6 404 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 RHBDD2Q6NTF9 364 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 CENPUQ71F23 418 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 GSTA5Q7RTV2 222 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 SPNS2Q8IVW8 549 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 DCUN1D3Q8IWE4 304 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 AGGF1Q8N302 714 aaeCLIP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 C2orf73Q8N5S3 287 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 ZBTB2Q8N680 514 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 OR2L8Q8NGY9 312 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 CFAP61Q8NHU2 1237 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 DENND1AQ8TEH3 1009 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 MS4A14Q96JA4 679 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 DPH2Q9BQC3 489 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 SLC22A11Q9NSA0 550 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 GALPQ9UBC7 116 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 ANAPC5Q9UJX4 755 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 SNX7Q9UNH6 387 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 RUVBL2Q9Y230 463 aaKnown RBP10.63□□□□□ -0.71
SSBP3-206ENST00000420121 KLHL20Q9Y2M5 609 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 A0A1W2PPV9 198 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 F8W8V4 182 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 AP3B1O00203 1094 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 SNPHO15079 494 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 NIPSNAP2O75323 286 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 OR2B3O76000 313 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 C1orf105O95561 183 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 KRT14P02533 472 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 ITGAXP20702 1163 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 BDKRB1P46663 353 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 VPS41P49754 854 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 TERF1P54274 439 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 EIF3BP55884 814 aaKnown RBP10.62□□□□□ -0.71
SSBP3-206ENST00000420121 FOXL2P58012 376 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 KLRB1Q12918 225 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 GPS1Q13098 491 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 PAPD7Q5XG87 772 aaKnown RBP10.62□□□□□ -0.71
SSBP3-206ENST00000420121 FCRL6Q6DN72 434 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 PTRHD1Q6GMV3 140 aaKnown RBP10.62□□□□□ -0.71
SSBP3-206ENST00000420121 ASB18Q6ZVZ8 466 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 TAX1BP1Q86VP1 789 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 LRRC6Q86X45 466 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 REXO1L1PQ8IX06 675 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 ZNF285Q96NJ3 590 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 TSSK1BQ9BXA7 367 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 ING2Q9H160 280 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 ENAMQ9NRM1 1142 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 HOMER3Q9NSC5 361 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 IL1RAPL1Q9NZN1 696 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 DHCR7Q9UBM7 475 aaKnown RBP10.62□□□□□ -0.71
SSBP3-206ENST00000420121 GNPTGQ9UJJ9 305 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 MED16Q9Y2X0 877 aa10.62□□□□□ -0.71
SSBP3-206ENST00000420121 PCDHGA9Q9Y5G4 932 aaKnown RBP10.62□□□□□ -0.71
SSBP3-206ENST00000420121 UTP20O75691 2785 aaKnown RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 ZCWPW2A0A1B0GU75 182 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 CLEC18AA5D8T8 446 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 MAP3K7O43318 606 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 NRP2O60462 931 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 NDUFS3O75489 264 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 MATN4O95460 622 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 S1PR4O95977 384 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 F7P08709 466 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 HBQ1P09105 142 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 OGNP20774 298 aaKnown RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 PSMB5P28074 263 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 MAGEA3P43357 314 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 ADARP55265 1226 aaKnown RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 YBX1P67809 324 aaKnown RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 ATP1A4Q13733 1029 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 DSG2Q14126 1118 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 TMED2Q15363 201 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 C1orf189Q5VU69 101 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 ARMC3Q5W041 872 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 MRPL14Q6P1L8 145 aaKnown RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 CLEC18BQ6UXF7 455 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 GPR135Q8IZ08 494 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 ZNF655Q8N720 491 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-206ENST00000420121 CLEC18CQ8NCF0 446 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 HMGCLL1Q8TB92 370 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 COG1Q8WTW3 980 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 MIB2Q96AX9 1013 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 PANX3Q96QZ0 392 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 SLC30A3Q99726 388 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 EURLQ9NYK6 297 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 PLCL2Q9UPR0 1127 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms