RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 MIB2Q96AX9 1013 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 SLC22A18Q96BI1 424 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 MENTQ9BUN1 341 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 IL22Q9GZX6 179 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 TREX1Q9NSU2 369 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 BFARQ9NZS9 450 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 MARCH4Q9P2E8 410 aaPredicted RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 GPN3Q9UHW5 284 aaPredicted RBP9.09□□□□□ -0.95
NUP50-205ENST00000419387 PLCL2Q9UPR0 1127 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 PADI2Q9Y2J8 665 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 ZNF451Q9Y4E5 1061 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
NUP50-205ENST00000419387 SEC16AO15027 2179 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 TTLL8A6PVC2 850 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 KPNA5O15131 536 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 ZNF185O15231 689 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 ZSCAN9O15535 394 aaPredicted RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 NDUFS3O75489 264 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 KLF7O75840 302 aaPredicted RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 S1PR4O95977 384 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 CTSBP07858 339 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 RPS3P23396 243 aaKnown RBP eCLIP9.08□□□□□ -0.96
NUP50-205ENST00000419387 NMBRP28336 390 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 KCNJ1P48048 391 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 RRADP55042 308 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 CRADDP78560 199 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 CDK16Q00536 496 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 GRB7Q14451 532 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 TMED2Q15363 201 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 C1orf189Q5VU69 101 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 PTRHD1Q6GMV3 140 aaKnown RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 LRRC8BQ6P9F7 803 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 TTC23LQ6PF05 361 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 ATCAYQ86WG3 371 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 LRRC6Q86X45 466 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 RAB43Q86YS6 212 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 DCUN1D3Q8IWE4 304 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 FAM20CQ8IXL6 584 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 MPP5Q8N3R9 675 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 C2orf73Q8N5S3 287 aaPredicted RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 ZNF655Q8N720 491 aaPredicted RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 LMNTD1Q8N9Z9 388 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 FDCSPQ8NFU4 85 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 TRIM58Q8NG06 486 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 OR2L8Q8NGY9 312 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 GSDMBQ8TAX9 411 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 ANP32BQ92688 251 aaKnown RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 IP6K3Q96PC2 410 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 IL17FQ96PD4 163 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 PANX3Q96QZ0 392 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 KIFC1Q9BW19 673 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 P2RY12Q9H244 342 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 MRM3Q9HC36 420 aaKnown RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 HOMER3Q9NSC5 361 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 TXLNGQ9NUQ3 528 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 IRAK4Q9NWZ3 460 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 EURLQ9NYK6 297 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 DHCR7Q9UBM7 475 aaKnown RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 NDOR1Q9UHB4 597 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 GNPTGQ9UJJ9 305 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 SLC39A10Q9ULF5 831 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 G3BP2Q9UN86 482 aaKnown RBP9.08□□□□□ -0.96
NUP50-205ENST00000419387 SRPK3Q9UPE1 567 aa9.08□□□□□ -0.96
NUP50-205ENST00000419387 UBR5O95071 2799 aaPredicted RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 A6NL46 340 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 RASGRF2O14827 1237 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 CEP104O60308 925 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 DPM1O60762 260 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 VAPBO95292 243 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 TPSB2P20231 275 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 MAGP20916 626 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 ALAS2P22557 587 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 MGAT1P26572 445 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 OTX2P32243 289 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 FOLR3P41439 243 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 ARSFP54793 590 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 ATP1A4Q13733 1029 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 SF1Q15637 639 aaKnown RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 TPSAB1Q15661 275 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 FIGLAQ6QHK4 219 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 OTOAQ7RTW8 1153 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 SDCCAG8Q86SQ7 713 aaPredicted RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 HPS6Q86YV9 775 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 MCATQ8IVS2 390 aaKnown RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 C17orf53Q8N3J3 647 aaPredicted RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 CPT1CQ8TCG5 803 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 DENND1AQ8TEH3 1009 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 DLG3Q92796 817 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 RAD51AP1Q96B01 352 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 PTERQ96BW5 349 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 MFSD3Q96ES6 412 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 FER1L6-AS2Q96M78 137 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 SMAD5Q99717 465 aaKnown RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 NDC1Q9BTX1 674 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 NUDT9Q9BW91 350 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms