RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SNHG28P0DPA3 235 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 CPB1P15086 417 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 PAMP19021 973 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 SDHBP21912 280 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 MXD1Q05195 221 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 BAMBIQ13145 260 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 LARP4Q71RC2 724 aaKnown RBP eCLIP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 JAZF1Q86VZ6 243 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 OR7G3Q8NG95 312 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 RTP4Q96DX8 246 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 RBP7Q96R05 134 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 PAK6Q9NQU5 681 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 KCMF1Q9P0J7 381 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 LIMD1Q9UGP4 676 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 ZNF222Q9UK12 451 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 ABCG2Q9UNQ0 655 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 TMX2Q9Y320 296 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 PKP3Q9Y446 797 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 ORC6Q9Y5N6 252 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 GJA3Q9Y6H8 435 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 A3GALT2U3KPV4 340 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 A0A1W2PPL8 197 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 UBFD1O14562 309 aaKnown RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 PLOD3O60568 738 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 LDOC1O95751 146 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 HPRP00739 348 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 SUPT20HL2P0C7V6 817 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 TPH1P17752 444 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 RYKP34925 604 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 ETV6P41212 452 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 AP1S2P56377 157 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 RRAS2P62070 204 aaPredicted RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 GPR17Q13304 367 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 CCINQ13939 588 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 CLLU1Q5K131 121 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 SPOUT1Q5T280 376 aaKnown RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 FRMPD2BQ6IN97 320 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 MOXD1Q6UVY6 613 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 SLC46A3Q7Z3Q1 461 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 CEP97Q8IW35 865 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 MIER2Q8N344 545 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 PNPLA1Q8N8W4 532 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 WDR36Q8NI36 951 aaKnown RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 UTP15Q8TED0 518 aaKnown RBP12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 ISL2Q96A47 359 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 UPRTQ96BW1 309 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 TEKT3Q9BXF9 490 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 LDAHQ9H6V9 325 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 GSN-AS1Q9NRJ2 163 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 LIPT1Q9Y234 373 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 BTRCQ9Y297 605 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 SLIT2O94813 1529 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 TAF1P21675 1872 aa12.26□□□□□ -0.45
SLC28A1-203ENST00000394573 LOC102723532A0A0G2JNH3 316 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 TO15178 435 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ATG12O94817 140 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ECDO95905 644 aaPredicted RBP12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 APOC3P02656 99 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 CPN2P22792 545 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 CHMP24386 653 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 IGFBP5P24593 272 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PSMB4P28070 264 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PPP4CP60510 307 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 NFIXQ14938 502 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 WSCD2Q2TBF2 565 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ZACNQ401N2 412 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 CYS1Q717R9 158 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 GALNT10Q86SR1 603 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 DNASE1L2Q92874 299 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ZNF566Q969W8 418 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PIWIL1Q96J94 861 aaKnown RBP12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 CNPPD1Q9BV87 410 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 RBCK1Q9BYM8 510 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 SMPD4Q9NXE4 827 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ARHGAP28Q9P2N2 729 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PGAP2Q9UHJ9 254 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 hCG_1807616A0A1W2PRN6 198 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ASPDHA6ND91 283 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 TARM1B6A8C7 271 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 CBX4O00257 560 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ANKRD28O15084 1053 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 KPNA5O15131 536 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PRPSAP2O60256 369 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PGK1P00558 417 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 APOA4P06727 396 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 SLC2A3P11169 496 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ZNF3P17036 446 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 DCTP40126 519 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 PYDC2Q56P42 97 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 ARHGAP17Q68EM7 881 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 DET1Q7L5Y6 550 aa12.25□□□□□ -0.45
SLC28A1-203ENST00000394573 C11orf96Q7Z7L8 435 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms