RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 GGT1P19440 569 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 CSKP41240 450 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 C2orf73Q8N5S3 287 aaPredicted RBP15.77■□□□□ 0.11
PCDH1-203ENST00000394536 GTPBP3Q969Y2 492 aaKnown RBP15.77■□□□□ 0.11
PCDH1-203ENST00000394536 PPP1R14BQ96C90 147 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 KAT8Q9H7Z6 458 aaKnown RBP15.77■□□□□ 0.11
PCDH1-203ENST00000394536 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 SARDHQ9UL12 918 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 AP3M1Q9Y2T2 418 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 MANSC4A6NHS7 340 aaPredicted RBP15.76■□□□□ 0.11
PCDH1-203ENST00000394536 KPNA5O15131 536 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 ERN1O75460 977 aaKnown RBP15.76■□□□□ 0.11
PCDH1-203ENST00000394536 TCF3P15923 654 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 DCTP40126 519 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 CTSKP43235 329 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 SLC13A2Q13183 592 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 CBLBQ13191 982 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 SPCS2Q15005 226 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 COQ5Q5HYK3 327 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 BHLHA9Q7RTU4 235 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 MIEF1Q9NQG6 463 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 SACM1LQ9NTJ5 587 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 TBCCD1Q9NVR7 557 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 ABCD2Q9UBJ2 740 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 HRH2P25021 359 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 RXRGP48443 463 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 GRIK2Q13002 908 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 PTCHD3Q3KNS1 767 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 SPRED1Q7Z699 444 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 VPS35Q96QK1 796 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 SYT17Q9BSW7 474 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 ZBED2Q9BTP6 218 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 KCTD5Q9NXV2 234 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 HCSTQ9UBK5 93 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 UTS2RQ9UKP6 389 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 ILVBLA1L0T0 632 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 MAGEB17A8MXT2 336 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 HAS3O00219 553 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 TNFRSF10BO14763 440 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 CACNG3O60359 315 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 MT-ND2P03891 347 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 GBAP04062 536 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 C7P10643 843 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 CRHBPP24387 322 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 AZGP1P25311 298 aaKnown RBP15.76■□□□□ 0.11
PCDH1-203ENST00000394536 CDH12P55289 794 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 RRM2BQ7LG56 351 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 COLGALT2Q8IYK4 626 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 GOLM1Q8NBJ4 401 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 DCSTAMPQ9H295 470 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 TMCC3Q9ULS5 477 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 PCDHB14Q9Y5E9 798 aa15.76■□□□□ 0.11
PCDH1-203ENST00000394536 PDZK1P1A8MUH7 402 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 SYN3O14994 580 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 KDELR3O43731 214 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 SPAM1P38567 509 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 EPHB3P54753 998 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 CPTPQ5TA50 214 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 DEPDC1Q5TB30 811 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 USP45Q70EL2 814 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 TRUB1Q8WWH5 349 aaKnown RBP15.75■□□□□ 0.11
PCDH1-203ENST00000394536 MYEOVQ96EZ4 313 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 SLC39A13Q96H72 371 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 EGLN2Q96KS0 407 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 INPP5KQ9BT40 448 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 NDEL1Q9GZM8 345 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 ALPLP05186 524 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 PORP16435 677 aaPredicted RBP15.75■□□□□ 0.11
PCDH1-203ENST00000394536 FUT4P22083 530 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 SLC6A4P31645 630 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 PIGAP37287 484 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 HK3P52790 923 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 TUBA3CQ13748 450 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 SMN1Q16637 294 aaKnown RBP15.75■□□□□ 0.11
PCDH1-203ENST00000394536 CYP2U1Q7Z449 544 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 FAR1Q8WVX9 515 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 ZNF347Q96SE7 839 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 CD244Q9BZW8 370 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 BRD9Q9H8M2 597 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 TNFRSF11BO00300 401 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 E2F3O00716 465 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 CAPN15O75808 1086 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 NPPAP01160 153 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 MANEALQ5VSG8 457 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 TMC5Q6UXY8 1006 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 TRMT11Q7Z4G4 463 aaKnown RBP15.75■□□□□ 0.11
PCDH1-203ENST00000394536 ZNF583Q96ND8 569 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 DNAJC11Q9NVH1 559 aa15.75■□□□□ 0.11
PCDH1-203ENST00000394536 EFCAB10A6NFE3 127 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 SAP18O00422 153 aaKnown RBP15.74■□□□□ 0.11
PCDH1-203ENST00000394536 GSTM1P09488 218 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 ANXA4P09525 319 aaPredicted RBP15.74■□□□□ 0.11
PCDH1-203ENST00000394536 PAX3P23760 479 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 ZNF284Q2VY69 593 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 SNX20Q7Z614 316 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 ADGRG2Q8IZP9 1017 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 OR8J3Q8NGG0 315 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 PHF10Q8WUB8 498 aaKnown RBP15.74■□□□□ 0.11
PCDH1-203ENST00000394536 PEX13Q92968 403 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 TCF25Q9BQ70 676 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms