RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 RBM12BQ8IXT5 1001 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 SELENOMQ8WWX9 145 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 EGLN2Q96KS0 407 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 GLYATL1P3A0A0U1RQE8 302 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 NDUFS2O75306 463 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 EBLN1P0CF75 366 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 HMGA1P17096 107 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 BPIP17213 487 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 IDUAP35475 653 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 HNF1BP35680 557 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 GPRC6AQ5T6X5 926 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TRIM46Q7Z4K8 759 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 APCDD1Q8J025 514 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 PYCR2Q96C36 320 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 CPPED1Q9BRF8 314 aaPredicted RBP13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TNKS2Q9H2K2 1166 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 ARL15Q9NXU5 204 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 ERVK-18Q9QC07 812 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TRBV5-3A0A0A0MS03 114 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 PER2O15055 1255 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 ACRV1P26436 265 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 NRIP1P48552 1158 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 NKX3-2P78367 333 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 SMAD3P84022 425 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 RELAQ04206 551 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 CBX3Q13185 183 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 CDK5R2Q13319 367 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 CDH18Q13634 790 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 PERM1Q5SV97 790 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 ZDHHC21Q8IVQ6 265 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 RNF175Q8N4F7 328 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 MCOLN3Q8TDD5 553 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 PYURFQ96I23 114 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 RHNO1Q9BSD3 238 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 CWH43Q9H720 699 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 SERHLQ9NQF3 203 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 TRPS1Q9UHF7 1281 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 ENPP5Q9UJA9 477 aa13.61□□□□□ -0.23
GAPVD1-205ENST00000394084 FAM220BPB1ANY3 271 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 hCG_2039718K7EN88 272 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 CLDN9O95484 217 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 ANGPTL1O95841 491 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 IGFBP5P24593 272 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 TPP2P29144 1249 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 CD97P48960 835 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 BCAP31P51572 246 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 EMX1Q04741 257 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 DGCR6Q14129 220 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 RGMBQ6NW40 437 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 DOK6Q6PKX4 331 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 CEP68Q76N32 757 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 ZNF551Q7Z340 670 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 RNF180Q86T96 592 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 CYP4Z1Q86W10 505 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 CHPT1Q8WUD6 406 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 PPT2Q9UMR5 302 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 ABCG2Q9UNQ0 655 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 ERGIC3Q9Y282 383 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 ZNF99A8MXY4 864 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 SULT1C4O75897 302 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 KRT6AP02538 564 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 KRT6BP04259 564 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 RETP07949 1114 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 PCMT1P22061 227 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 KRT6CP48668 564 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 BCL2L1Q07817 233 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 OR4F3Q6IEY1 312 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 TMEM132CQ8N3T6 1108 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 NTMT1Q9BV86 223 aa13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 KLF16Q9BXK1 252 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-205ENST00000394084 WDR47O94967 919 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 GZMMP51124 257 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 SMARCB1Q12824 385 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 TOP3AQ13472 1001 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 CTF1Q16619 201 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 SLCO6A1Q86UG4 719 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 CALHM3Q86XJ0 350 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 CDC26Q8NHZ8 85 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 USP7Q93009 1102 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 APOLD1Q96LR9 279 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 EBPLQ9BY08 206 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 KCNH6Q9H252 994 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 ELOVL6Q9H5J4 265 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 ERN1O75460 977 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 RECQL5O94762 991 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 TRBC1P01850 177 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 EPORP19235 508 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms