RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PPP5CP53041 499 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 ZNHIT3Q15649 155 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-203ENST00000391813 ZBTB6Q15916 424 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 PLEKHG7Q6ZR37 379 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 HIST3H2AQ7L7L0 130 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 ZNF516Q92618 1163 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 HIST1H2ACQ93077 130 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 ZNF717Q9BY31 904 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-203ENST00000391813 CLEC4AQ9UMR7 237 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 NT5C1B-RDH14C9J2C7 533 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 NDST2P52849 883 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 ABHD18Q0P651 414 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 SH3PXD2AQ5TCZ1 1133 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 NCBP2-AS2Q69YL0 99 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 HACD2Q6Y1H2 254 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 COMMD2Q86X83 199 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 IGDCC3Q8IVU1 814 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 POF1BQ8WVV4 589 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 DDX1Q92499 740 aaKnown RBP19.29■□□□□ 0.68
SHANK1-203ENST00000391813 MALT1Q9UDY8 824 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 SNED1Q8TER0 1413 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 ZNF487B1APH4 448 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 E9PAM4 449 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 CLDN11O75508 207 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 CDK4P11802 303 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 POU2F1P14859 743 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 PRPS1L1P21108 318 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 MYF6P23409 242 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 GABARAPL2P60520 117 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 SMAD3P84022 425 aaKnown RBP19.29■□□□□ 0.68
SHANK1-203ENST00000391813 FUT10Q6P4F1 479 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 STX12Q86Y82 276 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 CLIP4Q8N3C7 705 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 MAPKAP1Q9BPZ7 522 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 DPAGT1Q9H3H5 408 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 C11orf16Q9NQ32 467 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 TBC1D24Q9ULP9 559 aa19.29■□□□□ 0.68
SHANK1-203ENST00000391813 COL16A1Q07092 1604 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 AKAP8O43823 692 aaKnown RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 FBXO48Q5FWF7 155 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 CDHR3Q6ZTQ4 885 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 LMAN2LQ9H0V9 348 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 ZFYVE1Q9HBF4 777 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 STOMP27105 288 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 PDE12Q6L8Q7 609 aaKnown RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 LGI4Q8N135 537 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 NPLOC4Q8TAT6 608 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 PYURFQ96I23 114 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 HERC2P3Q9BVR0 1158 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 NUP50Q9UKX7 468 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 METTL21EPA6NDL7 271 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 KPNA3O00505 521 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 ERAL1O75616 437 aaKnown RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 SNAP29O95721 258 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 HLA-DQA2P01906 255 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 AHSGP02765 367 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 HOXD13P35453 343 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 HCAR3P49019 387 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 OGDHQ02218 1023 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 KCNAB2Q13303 367 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 SMG7Q92540 1137 aaKnown RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 ANKRD60Q9BZ19 345 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 PAK1IP1Q9NWT1 392 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 UCKL1Q9NWZ5 548 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 RNF186Q9NXI6 227 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 CDC14AQ9UNH5 594 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 TLR5O60602 858 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 ITPKAP23677 461 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 PPP2R2BQ00005 443 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 C2orf80Q0P641 193 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 CCBE1Q6UXH8 406 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-203ENST00000391813 CPNE9Q8IYJ1 553 aa19.28■□□□□ 0.68
SHANK1-203ENST00000391813 PITPNM1O00562 1244 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 GNB5O14775 395 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 ZNF433Q8N7K0 673 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-203ENST00000391813 PPP1R14AQ96A00 147 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 CREB3L1Q96BA8 519 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 LGALS12Q96DT0 336 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 FZD8Q9H461 694 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 TVP23BQ9NYZ1 205 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 SNNO75324 88 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-203ENST00000391813 PTTG1O95997 202 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 IFNA6P05013 189 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 ITGB1P05556 798 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 MYCLP1P12525 358 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-203ENST00000391813 ADAM15Q13444 863 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 RABL3Q5HYI8 236 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 UGT2A3Q6UWM9 527 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 XAGE5Q8WWM1 108 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 BORCS6Q96GS4 357 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 ZFP3Q96NJ6 502 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 USP29Q9HBJ7 922 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 TM9SF3Q9HD45 589 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 COL2A1P02458 1487 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-203ENST00000391813 CTPS1P17812 591 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 GSTM2P28161 218 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 GABRR2P28476 465 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 EIF5AP63241 154 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms