RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 HIST1H2AHQ96KK5 128 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 CCDC138Q96M89 665 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 PKP4Q99569 1192 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 HIST1H2AJQ99878 128 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 H2AFJQ9BTM1 129 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 DERL2Q9GZP9 239 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 AK5Q9Y6K8 562 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 PABPN1LA6NDY0 278 aaKnown RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ISM1B1AKI9 464 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 POC1B-GALNT4F8VUJ3 575 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 MAP3K7O43318 606 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 MPOP05164 745 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 UGT2B7P16662 529 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 CDH3P22223 829 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PGGT1BP53609 377 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ATP6V0D1P61421 351 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 HSD11B2P80365 405 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ZNF460Q14592 562 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 UHMK1Q8TAS1 419 aaKnown RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SMPDL3AQ92484 453 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 UBXN10Q96LJ8 280 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SLC46A1Q96NT5 459 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 IL17FQ96PD4 163 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 OR2A14Q96R47 310 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 NRTNQ99748 197 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 DHRS4Q9BTZ2 278 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 EPB41L4BQ9H329 900 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PPCSQ9HAB8 311 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SPHK1Q9NYA1 384 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ADAMTS6Q9UKP5 1117 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PDE10AQ9Y233 779 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 V9GYY5 206 aaPredicted RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SPEGQ15772 3267 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 IGHV5-51A0A0C4DH38 117 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 HMX2A2RU54 273 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 TMEM8BA6NDV4 472 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PHGDHO43175 533 aaKnown RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SYF2O95926 243 aaKnown RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 CCDC166P0CW27 439 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 OAS2P29728 719 aaKnown RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ARL4DP49703 201 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SERPINB8P50452 374 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PNLIPRP1P54315 467 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 RAB15P59190 212 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ERVPABLB-1P60509 514 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 MC2RQ01718 297 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 RAPH1Q70E73 1250 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ADAMTSL2Q86TH1 951 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 SPNS2Q8IVW8 549 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 BMPERQ8N8U9 685 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 AENQ8WTP8 325 aaKnown RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 DCAKDQ8WVC6 231 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ANKRD49Q8WVL7 239 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 DLG3Q92796 817 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 ZNF578Q96N58 590 aaPredicted RBP12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PARD6BQ9BYG5 372 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 CHRNA10Q9GZZ6 450 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 CTNNAL1Q9UBT7 734 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 CIDEBQ9UHD4 219 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 RAB21Q9UL25 225 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 BTRCQ9Y297 605 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 PCDHGA7Q9Y5G6 932 aa12.8□□□□□ -0.36
CKAP2-202ENST00000378034 KIF26BQ2KJY2 2108 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 A0A087X1B8 175 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 A0A0J9YY10 115 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 CCDC189A1A4V9 331 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 EFCAB7A8K855 629 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 PRICKLE3O43900 615 aaPredicted RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 KRT37O76014 449 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 TNFSF15O95150 251 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 SLC16A8O95907 504 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 SLC35E2BP0CK96 405 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 FGF3P11487 239 aaPredicted RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 PEBP1P30086 187 aaKnown RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 SEPHS1P49903 392 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 CSRP3P50461 194 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 NAA25Q14CX7 972 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 TMEM164Q5U3C3 297 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 FBXO38Q6PIJ6 1188 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 ADGRD1Q6QNK2 874 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 SBSNQ6UWP8 590 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 TBC1D1Q86TI0 1168 aaPredicted RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 FAM129CQ86XR2 697 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 D2HGDHQ8N465 521 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 ZNF480Q8WV37 535 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 UBLCP1Q8WVY7 318 aaPredicted RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 ATL1Q8WXF7 558 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 CAVIN3Q969G5 261 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 ISL2Q96A47 359 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms