RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CNTN2Q02246 1040 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 MARCH10Q8NA82 808 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 KLHL5Q96PQ7 755 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 FEM1AQ9BSK4 669 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 NUP188Q5SRE5 1749 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ACSL4O60488 711 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 PAGE1O75459 146 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 SLC35G4P0C7Q5 338 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GNA12Q03113 381 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 VN1R5Q7Z5H4 357 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GLIS3Q8NEA6 775 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 OR10G2Q8NGC3 310 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 KIAA1191Q96A73 305 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 TXLNGYQ9BZA5 131 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 A3GALT2U3KPV4 340 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 HTR3EA5X5Y0 456 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CDH8P55286 799 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 RAET1EQ8TD07 263 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF431Q8TF32 576 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 CEP41Q9BYV8 373 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 NLGN3Q9NZ94 848 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 TLR6Q9Y2C9 796 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 NUAK1O60285 661 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ARL6IP1Q15041 203 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 GPR158Q5T848 1215 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 HSPBAP1Q96EW2 488 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF382Q96SR6 550 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 FUOMA2VDF0 154 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 HLA-DQA2P01906 255 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 MATN1P21941 496 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 XKP51811 444 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 ZC3HC1Q86WB0 502 aaKnown RBP9.99□□□□□ -0.81
PTCH1-204ENST00000375290 COMMD2Q86X83 199 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 OR8J1Q8NGP2 316 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
PTCH1-204ENST00000375290 RAB19A4D1S5 217 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 DDTLA6NHG4 134 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-204ENST00000375290 HTR1BP28222 390 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 CDKL4Q5MAI5 379 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 SNX20Q7Z614 316 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 IL31RAQ8NI17 732 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 FBXW11Q9UKB1 542 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 YDJCA8MPS7 323 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 RFPL1O75677 317 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 C22orf31O95567 290 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 CHRNB2P17787 502 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 PHYKPLQ8IUZ5 450 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 P2RX2Q9UBL9 471 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 M0R2N6 131 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 FFAR3O14843 346 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 GPR42O15529 346 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 CRADDP78560 199 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 TGFBIQ15582 683 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 PCDH19Q8TAB3 1148 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 RTP4Q96DX8 246 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 C12orf65Q9H3J6 166 aaKnown RBP9.98□□□□□ -0.81
PTCH1-204ENST00000375290 DTLQ9NZJ0 730 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 COLEC10Q9Y6Z7 277 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 GNAO1P09471 354 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 GSK3BP49841 420 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 PAFAH1B3Q15102 231 aaKnown RBP9.98□□□□□ -0.81
PTCH1-204ENST00000375290 SLC36A4Q6YBV0 504 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 RAVER1Q8IY67 606 aaKnown RBP9.98□□□□□ -0.81
PTCH1-204ENST00000375290 SLC22A18Q96BI1 424 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 FCRL4Q96PJ5 515 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 OSMRQ99650 979 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 A8MT66 165 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 OR5T2Q8NGG2 359 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 RANBP9Q96S59 729 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 GRM6O15303 877 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 INSIG1O15503 277 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 DNM1P34Q6PK57 102 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 ELP3Q9H9T3 547 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 TRAV19A0A0A6YYK7 116 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 PCDHGA12O60330 932 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 ST3GAL3Q11203 375 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 DUOXA1Q1HG43 343 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 KCNJ9Q92806 393 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 PIK3C2AO00443 1686 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 L7N2F9 121 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 TLR4O00206 839 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 RFC2P35250 354 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 INHBEP58166 350 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 XKR4Q5GH76 650 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 NCEH1Q6PIU2 408 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 TRNT1Q96Q11 434 aaKnown RBP9.98□□□□□ -0.81
PTCH1-204ENST00000375290 EBF4Q9BQW3 602 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 PACSIN3Q9UKS6 424 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
PTCH1-204ENST00000375290 DCLK1O15075 740 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SCN2BO60939 215 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 XRCC1P18887 633 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 DPP6P42658 865 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 NFATC3Q12968 1075 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MPPE1Q53F39 396 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MBOAT1Q6ZNC8 495 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 GALNT7Q86SF2 657 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms