RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 MAGIXQ9H6Y5 334 aa14.07□□□□□ -0.16
PHTF1-204ENST00000369604 POPDC3Q9HBV1 291 aa14.07□□□□□ -0.16
PHTF1-204ENST00000369604 EXOSC4Q9NPD3 245 aaKnown RBP14.07□□□□□ -0.16
PHTF1-204ENST00000369604 AGO1Q9UL18 857 aaKnown RBP14.07□□□□□ -0.16
PHTF1-204ENST00000369604 COL4A5P29400 1685 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 MN1Q10571 1320 aaPredicted RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 SEC22BO75396 215 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 HAPLN1P10915 354 aaPredicted RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 ARHGAP1Q07960 439 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 FOXD4Q12950 439 aaPredicted RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 IHHQ14623 411 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 PROX2Q3B8N5 592 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 LYPD8Q6UX82 237 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 ZNF438Q7Z4V0 828 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 LIX1Q8N485 282 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 NKAPQ8N5F7 415 aaKnown RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 OR4F6Q8NGB9 312 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 UBASH3BQ8TF42 649 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 EEF1AKMT1Q8WVE0 214 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 SMARCD1Q96GM5 515 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 TOR4AQ9NXH8 423 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 NPAP1Q9NZP6 1156 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 A0A0G2JMZ2 1700 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 LRRC37A2A6NM11 1700 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 SLC12A8A0AV02 714 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 E5RI56 91 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 CPNE3O75131 537 aaKnown RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 NIPSNAP2O75323 286 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 VPS26AO75436 327 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 CA5AP35218 305 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 HTR2BP41595 481 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 IDH2P48735 452 aaKnown RBP14.06□□□□□ -0.16
PHTF1-204ENST00000369604 SUOXP51687 545 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 ARPP19P56211 112 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 CD83Q01151 205 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 ARMCX4Q5H9R4 360 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 ZNF382Q96SR6 550 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 SLC30A2Q9BRI3 323 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 STMN3Q9NZ72 180 aa14.06□□□□□ -0.16
PHTF1-204ENST00000369604 E2F3O00716 465 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 IRAK2O43187 625 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 WBP4O75554 376 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 YES1P07947 543 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 HK3P52790 923 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 IL2P60568 153 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 CACHD1Q5VU97 1274 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 KDM4DQ6B0I6 523 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 MSRB3Q8IXL7 192 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 ZNF675Q8TD23 568 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 MYDGFQ969H8 173 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 TMCO6Q96DC7 493 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 PPP3R2Q96LZ3 170 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 KCNC2Q96PR1 638 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 RANGRFQ9HD47 186 aaPredicted RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 NDRG4Q9ULP0 352 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 NUP214P35658 2090 aaPredicted RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 ANKRD28O15084 1053 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 GUCA1CO95843 209 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 DNAJA1P31689 397 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 NPRL3Q12980 569 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 RUNDC3AQ59EK9 446 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 FYTTD1Q96QD9 318 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 MMP28Q9H239 520 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 RUBCNLQ9H714 662 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 REEP1Q9H902 201 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 ATP13A1Q9HD20 1204 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 SLC6A13Q9NSD5 602 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 CRNNQ9UBG3 495 aaPredicted RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 NUFIP1Q9UHK0 495 aaKnown RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 NEUROG3Q9Y4Z2 214 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 SEMA3DO95025 777 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 EFNA1P20827 205 aaPredicted RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 HNF4AP41235 474 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 UGT2B15P54855 530 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 DMC1Q14565 340 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 RAB41Q5JT25 222 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 BHLHA9Q7RTU4 235 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 SLC46A3Q7Z3Q1 461 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 C10orf111Q8N326 155 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 ST13P5Q8NFI4 369 aaPredicted RBP14.05□□□□□ -0.16
PHTF1-204ENST00000369604 CDCA5Q96FF9 252 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 CDKN2AIPNLQ96HQ2 116 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 SLA2Q9H6Q3 261 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 ERVW-1Q9UQF0 538 aa14.05□□□□□ -0.16
PHTF1-204ENST00000369604 SBF1O95248 1867 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 MEIOCA2RUB1 952 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 KRT6AP02538 564 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 KRT6BP04259 564 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 MMP2P08253 660 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 STSP08842 583 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 FPR1P21462 350 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 DDOSTP39656 456 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 SLAMF1Q13291 335 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 SNX20Q7Z614 316 aa14.04□□□□□ -0.16
PHTF1-204ENST00000369604 VTCN1Q7Z7D3 282 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms