RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CFC1P0CG37 223 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 EFNA1P20827 205 aaPredicted RBP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 PTGER4P35408 488 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 MAP2K2P36507 400 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 CHRNA7P36544 502 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 CDKN1AP38936 164 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 LHX1P48742 406 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF41P51814 821 aaPredicted RBP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 TAF10Q12962 218 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 PPIGQ13427 754 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 MCMDC2Q4G0Z9 681 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM72AQ5TYM5 149 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM72DQ6L9T8 149 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 C11orf63Q6NUN7 778 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 SUSD1Q6UWL2 747 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 ISCA2Q86U28 154 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM72BQ86X60 149 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 CDK20Q8IZL9 346 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 BMPERQ8N8U9 685 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 GRAPLQ8TC17 118 aaPredicted RBP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 PHLDA1Q8WV24 401 aaPredicted RBP3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 ROBO4Q8WZ75 1007 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 MOB3AQ96BX8 217 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 ERVMER34-1Q9H9K5 563 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 DNAJC4Q9NNZ3 241 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 GKN1Q9NS71 199 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 TBC1D7Q9P0N9 293 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 TCF19Q9Y242 345 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 C2CD2Q9Y426 696 aa3.88□□□□□ -1.79
RNU6-560P-201ENST00000364007 BLOC1S5-TXNDC5H3BN57 136 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF197O14709 1029 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ATP6V0E1O15342 81 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 AP5Z1O43299 807 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 DDHD2O94830 711 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 NADKO95544 446 aaPredicted RBP3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 CSN3P07498 182 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 PRSS56P0CW18 603 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ANOS1P23352 680 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 HOXC8P31273 242 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ASCL1P50553 236 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 GCNT1Q02742 428 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ITGA7Q13683 1181 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 SQLEQ14534 574 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 P2RY6Q15077 328 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 HYAL4Q2M3T9 481 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ARMC3Q5W041 872 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ARHGAP17Q68EM7 881 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 C15orf39Q6ZRI6 1047 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 SH2D5Q6ZV89 423 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 SLC16A9Q7RTY1 509 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 CCDC186Q7Z3E2 898 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 NUDT13Q86X67 352 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 MFN1Q8IWA4 741 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 PIGBQ92521 554 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 SPSB1Q96BD6 273 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM20AQ96MK3 541 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZMAT2Q96NC0 199 aaKnown RBP3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 LRRC3BQ96PB8 259 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 CCDC3Q9BQI4 270 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 URM1Q9BTM9 101 aaKnown RBP3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 SLC25A23Q9BV35 468 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 KATNB1Q9BVA0 655 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 SLC2A11Q9BYW1 496 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 FZD8Q9H461 694 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 INTS9Q9NV88 658 aaKnown RBP3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 LIPGQ9Y5X9 500 aa3.87□□□□□ -1.79
RNU6-560P-201ENST00000364007 A0A0G2JLW4 131 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 ENO4A6NNW6 628 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 CLDN4O14493 209 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 PCDH7O60245 1069 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 RECQL5O94762 991 aaPredicted RBP3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 PTAFRP25105 342 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 ITGA3P26006 1051 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 CHRNB4P30926 498 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 HSPA4P34932 840 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 UBASH3AP57075 661 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 TUBB4BP68371 445 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 MZT1Q08AG7 82 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 GPR17Q13304 367 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 CUL3Q13618 768 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF273Q14593 569 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 HERC3Q15034 1050 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 ODF4Q2M2E3 257 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 TCTE1Q5JU00 501 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 PPP1R21Q6ZMI0 780 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM47EQ6ZV65 393 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 SLFN11Q7Z7L1 901 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 TLK2Q86UE8 772 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 PIGZQ86VD9 579 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 APLFQ8IW19 511 aaPredicted RBP3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM219AQ8IW50 185 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 MMD2Q8IY49 270 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 OR4C3Q8NH37 302 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 KIF18AQ8NI77 898 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 VANGL1Q8TAA9 524 aaPredicted RBP3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 EXT2Q93063 718 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 FBXO17Q96EF6 278 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms