RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 B4GALT4O60513 344 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CDRT1O95170 752 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 LRRN1Q6UXK5 716 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CHERPQ8IWX8 916 aaKnown RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TIGD4Q8IY51 512 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PMM1Q92871 262 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 GPR21Q99679 349 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 SPATA9Q9BWV2 254 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 FOLH1BQ9HBA9 442 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 STARD7Q9NQZ5 370 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 C1orf109Q9NX04 203 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MAT2BQ9NZL9 334 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 DNMT3LQ9UJW3 386 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CDC14AQ9UNH5 594 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TIMM13Q9Y5L4 95 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PLATP00750 562 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 RLN2P04090 185 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CSF2P04141 144 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CDK4P11802 303 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 UBE2R2Q712K3 238 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF248Q8NDW4 579 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 OR13J1Q8NGT2 312 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PPP1R13LQ8WUF5 828 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM203Q969S6 136 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TMED9Q9BVK6 235 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MRPL9Q9BYD2 267 aaKnown RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 SAV1Q9H4B6 383 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 C3orf14Q9HBI5 128 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TCF7L1Q9HCS4 588 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 COL20A1Q9P218 1284 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SLC19A2O60779 497 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PAGE1O75459 146 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HLA-DPB1P04440 258 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HLCSP50747 726 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CLCN4P51793 760 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 WSCD1Q658N2 575 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 AGBL3Q8NEM8 1001 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 C1QTNF7Q9BXJ2 289 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 WDR6Q9NNW5 1121 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 C14orf119Q9NWQ9 140 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 NDUFAF4Q9P032 175 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 KANSL3Q9P2N6 904 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 DAPL1A0PJW8 107 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 NKRFO15226 690 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 APOC3P02656 99 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TNFSF9P41273 254 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 RPS3AP61247 264 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 FADDQ13158 208 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 NDUFA9Q16795 377 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CERS6Q6ZMG9 384 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 DENND1CQ8IV53 801 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZBTB2Q8N680 514 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 LRRC52Q8N7C0 313 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 NCSTNQ92542 709 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 MIPEPQ99797 713 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 IFT27Q9BW83 186 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZDHHC6Q9H6R6 413 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SMURF1Q9HCE7 757 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 MKS1Q9NXB0 559 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZDHHC2Q9UIJ5 367 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 AGO1Q9UL18 857 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 OR10H2O60403 315 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 DFNA5O60443 496 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CLIC3O95833 236 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 MAN2A2P49641 1150 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 GTF2A2P52657 109 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CACNG1Q06432 222 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 BORAQ6PGQ7 559 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 GET4Q7L5D6 327 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 COMMD7Q86VX2 200 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF557Q8N988 423 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PYURFQ96I23 114 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HSPA12BQ96MM6 686 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PCDHGB7Q9Y5F8 929 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 C1orf167Q5SNV9 1468 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TLR4O00206 839 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HCN1O60741 890 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CILPO75339 1184 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ANXA4P09525 319 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HUNKP57058 714 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PMS2P3Q13401 168 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 LY6KQ17RY6 165 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 LGI4Q8N135 537 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 GOLM1Q8NBJ4 401 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SENP8Q96LD8 212 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 GPER1Q99527 375 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms