RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RNF180Q86T96 592 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 RCBTB1Q8NDN9 531 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 HTATIP2Q9BUP3 242 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ASF1BQ9NVP2 202 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 PCDHGC3Q9UN70 934 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 SNCAIPQ9Y6H5 919 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 MAP3K4Q9Y6R4 1608 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ALPPP05187 535 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 MPIP34949 423 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CCNFP41002 786 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 AVPR1BP47901 424 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 SNAPC2Q13487 334 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 FAM189A2Q15884 450 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 TIGD2Q4W5G0 525 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 GPR149Q86SP6 731 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 SLC30A2Q9BRI3 323 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 OR2B2Q9GZK3 357 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 FN3KQ9H479 309 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 PNPOQ9NVS9 261 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 HAO2Q9NYQ3 351 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ILVBLA1L0T0 632 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 RAB19A4D1S5 217 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 HDAC3O15379 428 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CRYZL1O95825 349 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CLCN5P51795 746 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 REP15Q6BDI9 236 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 SMYD5Q6GMV2 418 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 NCEH1Q6PIU2 408 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CPSF7Q8N684 471 aaKnown RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 AENQ8WTP8 325 aaKnown RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 LRRC58Q96CX6 371 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 VCPIP1Q96JH7 1222 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 TSSK3Q96PN8 268 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 C17orf62Q9BQA9 187 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 DCSTAMPQ9H295 470 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 TSPAN16Q9UKR8 245 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 PCDHB9Q9Y5E1 797 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 PPP1R3GB7ZBB8 358 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CREBL2O60519 120 aaPredicted RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 XKP51811 444 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 MARCH9Q86YJ5 346 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 LIX1Q8N485 282 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 DAGLBQ8NCG7 672 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ALPK1Q96QP1 1244 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 TWNKQ96RR1 684 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 NPLQ9BXD5 320 aaPredicted RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 NPFFR2Q9Y5X5 522 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 VSTM5A8MXK1 200 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CD47Q08722 323 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 PTPAQ15257 358 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 BOLLQ8N9W6 283 aaKnown RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 AURKBQ96GD4 344 aaPredicted RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 TMEM41AQ96HV5 264 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 RTFDC1Q9BY42 306 aaPredicted RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 LRTM1Q9HBL6 345 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 SMCO4Q9NRQ5 59 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 MINPP1Q9UNW1 487 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 NPEPPSL1A6NEC2 478 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ADAMTSL2Q86TH1 951 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 LMLNQ96KR4 655 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 OVOS2A0A0G2JMS6 1433 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 OVOS2A0A0J9YW53 1432 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 OVOS2Q6IE36 1432 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 IQGAP3Q86VI3 1631 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 FLRT2O43155 660 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 GKN3PP0CG01 181 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 CXCR1P25024 350 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 PRR5P85299 388 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 GANABQ14697 944 aaKnown RBP7.89□□□□□ -1.15
SCN8A-201ENST00000354534 NRSN1Q8IZ57 195 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 MITD1Q8WV92 249 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 HAS2Q92819 552 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 GAL3ST4Q96RP7 486 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ERVK-6Q9BXR3 956 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 ATG5Q9H1Y0 275 aa7.89□□□□□ -1.15
SCN8A-201ENST00000354534 SLC35F4A4IF30 521 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 HTR3EA5X5Y0 456 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 E9PI62 339 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CHADO15335 359 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RAB6AP20340 208 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 LSSP48449 732 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 RIDAP52758 137 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PARP6Q2NL67 630 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 MINDY4Q4G0A6 757 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ARL9Q6T311 187 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZDHHC21Q8IVQ6 265 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 UEVLDQ8IX04 471 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZNF527Q8NB42 609 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CHST13Q8NET6 341 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 SLC25A36Q96CQ1 311 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 GCM1Q9NP62 436 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CNOT11Q9UKZ1 510 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 KCNU1A8MYU2 1149 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 ZNF821O75541 412 aaPredicted RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 CNOT4O95628 575 aaKnown RBP7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PRMT2P55345 433 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 PMPCAQ10713 525 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 TMEM69Q5SWH9 247 aa7.88□□□□□ -1.15
SCN8A-201ENST00000354534 SLC43A2Q8N370 569 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms