RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 MKS1Q9NXB0 559 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 OGFRQ9NZT2 677 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 STOX2Q9P2F5 926 aaPredicted RBP21.48■■□□□ 1.03
SDC3-202ENST00000339394 GRID1Q9ULK0 1009 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 ACTL7BQ9Y614 415 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 PIEZO1Q92508 2521 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 A0A1W2PQM1 296 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 FAM221BA6H8Z2 402 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 SYCE1LA8MT33 242 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 TK2O00142 265 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 BTN3A3O00478 584 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 SPAG7O75391 227 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 PROS1P07225 676 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 ANXA5P08758 320 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 CEACAM1P13688 526 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 MTHFD2P13995 350 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 PNLIPRP1P54315 467 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 CCL7P80098 99 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 ILKQ13418 452 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 FASTKQ14296 549 aaKnown RBP21.48■■□□□ 1.03
SDC3-202ENST00000339394 ARHGAP19Q14CB8 494 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 CYP2A13Q16696 494 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 ANKS6Q68DC2 871 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 ADGRF3Q8IZF5 1079 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 C2orf73Q8N5S3 287 aaPredicted RBP21.48■■□□□ 1.03
SDC3-202ENST00000339394 EGFL8Q99944 293 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 EMCNQ9ULC0 261 aa21.48■■□□□ 1.03
SDC3-202ENST00000339394 OR5K3A6NET4 321 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 UBXN8O00124 270 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 OPA1O60313 960 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 RPLP0P05388 317 aaKnown RBP21.47■■□□□ 1.03
SDC3-202ENST00000339394 SBK3P0C264 359 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 HSD17B2P37059 387 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 CAPZBP47756 277 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 PPM1FP49593 454 aaPredicted RBP21.47■■□□□ 1.03
SDC3-202ENST00000339394 ZXDCQ2QGD7 858 aaPredicted RBP21.47■■□□□ 1.03
SDC3-202ENST00000339394 CCDC157Q569K6 752 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 KLHL35Q6PF15 583 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 AGTRAPQ6RW13 159 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 SYTL1Q8IYJ3 562 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 GOLGA6L1Q8N7Z2 621 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 PPFIBP2Q8ND30 876 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 OR2L8Q8NGY9 312 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 HMGCLL1Q8TB92 370 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 NCSTNQ92542 709 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 RHBDF1Q96CC6 855 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 TLCD1Q96CP7 247 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 CEP250Q9BV73 2442 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 ABCG4Q9H172 646 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 C12orf65Q9H3J6 166 aaKnown RBP21.47■■□□□ 1.03
SDC3-202ENST00000339394 LRRN3Q9H3W5 708 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 EPB41L1Q9H4G0 881 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 CD274Q9NZQ7 290 aa21.47■■□□□ 1.03
SDC3-202ENST00000339394 SUPT3HB4E1H0 165 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 TARM1B6A8C7 271 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 E7ENX8 843 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 GIPC1O14908 333 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 DUX1O43812 170 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 TYROBPO43914 113 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 SUPT3HO75486 399 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 RFPL3O75679 317 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 POLR2CP19387 275 aaPredicted RBP21.46■■□□□ 1.03
SDC3-202ENST00000339394 SDHBP21912 280 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 MAGOHP61326 146 aaKnown RBP21.46■■□□□ 1.03
SDC3-202ENST00000339394 TAP2Q03519 686 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 CFHR1Q03591 330 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 CDKL4Q5MAI5 379 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 AGBL2Q5U5Z8 902 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 USP53Q70EK8 1073 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 OOSP2Q86WS3 158 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 PDPRQ8NCN5 879 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 FBXL8Q96CD0 374 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 PKNOX2Q96KN3 472 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 ATG10Q9H0Y0 220 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 ACBD3Q9H3P7 528 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 SPHK1Q9NYA1 384 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 NUDT4Q9NZJ9 180 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 PLLPQ9Y342 182 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 PCDHGA1Q9Y5H4 931 aa21.46■■□□□ 1.03
SDC3-202ENST00000339394 SPAARA0A1B0GVQ0 90 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 CHRM5P08912 532 aaPredicted RBP21.45■■□□□ 1.02
SDC3-202ENST00000339394 HNMTP50135 292 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 NOVA1P51513 510 aaKnown RBP21.45■■□□□ 1.02
SDC3-202ENST00000339394 SQSTM1Q13501 440 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 CCDC153Q494R4 210 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 TAX1BP1Q86VP1 789 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 LRRC56Q8IYG6 542 aaPredicted RBP21.45■■□□□ 1.02
SDC3-202ENST00000339394 ATL1Q8WXF7 558 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 TWSG1Q9GZX9 223 aa21.45■■□□□ 1.02
SDC3-202ENST00000339394 IQCGQ9H095 443 aaKnown RBP21.45■■□□□ 1.02
SDC3-202ENST00000339394 SSU72Q9NP77 194 aaKnown RBP21.45■■□□□ 1.02
SDC3-202ENST00000339394 ZNF839A8K0R7 811 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 ATP8B1O43520 1251 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 PLIN3O60664 434 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 SIM1P81133 766 aaPredicted RBP21.44■■□□□ 1.02
SDC3-202ENST00000339394 PRKAA1Q13131 559 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 TTMPQ5BVD1 217 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 SULT1C3Q6IMI6 304 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 SUSD1Q6UWL2 747 aa21.44■■□□□ 1.02
SDC3-202ENST00000339394 SLCO6A1Q86UG4 719 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms