RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 IMP4Q96G21 291 aaKnown RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 SERPINB11Q96P15 392 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CINPQ9BW66 212 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GPRC5BQ9NZH0 403 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ILVBLA1L0T0 632 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 CENPXA8MT69 81 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 LOC730098B7Z3J9 87 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 FDXRP22570 491 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 WARSP23381 471 aaKnown RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 RPP38P78345 283 aaKnown RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 KIAA1191Q96A73 305 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 TUBA1CQ9BQE3 449 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 ZYG11BQ9C0D3 744 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 AKIP1Q9NQ31 210 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SNTG1Q9NSN8 517 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 QPCTLQ9NXS2 382 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 TEKT2Q9UIF3 430 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 WDR47O94967 919 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 ALDH2P05091 517 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 NUDT7P0C024 238 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 MSH3P20585 1137 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 FEN1P39748 380 aaKnown RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SLC14A1Q13336 389 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 BCL7AQ4VC05 210 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 MFSD14CQ5VZR4 134 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 LYSMD2Q8IV50 215 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 METTL4Q8N3J2 472 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 PDPRQ8NCN5 879 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 GPRC5AQ8NFJ5 357 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 FBXO32Q969P5 355 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 MTERF1Q99551 399 aaKnown RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SLC25A37Q9NYZ2 338 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 CACNA1CQ13936 2221 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SLC22A1O15245 554 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SNX4O95219 450 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 MED26O95402 600 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SNAI1O95863 264 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 MLLT6P55198 1093 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 FXNQ16595 210 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 ZMAT1Q5H9K5 638 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 C8orf82Q6P1X6 216 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 NRARPQ7Z6K4 114 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 TRNT1Q96Q11 434 aaKnown RBP13.88□□□□□ -0.19
PABPC1-201ENST00000318607 REEP1Q9H902 201 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 ABCC13Q9NSE7 274 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 SH3BP4Q9P0V3 963 aa13.88□□□□□ -0.19
PABPC1-201ENST00000318607 EVPLLA8MZ36 301 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 MTX2O75431 263 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 ALOX5P09917 674 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 MFSD10Q14728 455 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 BEND5Q7L4P6 421 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 SCD5Q86SK9 330 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 RGL4Q8IZJ4 473 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 MFSD4AQ8N468 514 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 KCTD13Q8WZ19 329 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 COQ7Q99807 217 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 APOL4Q9BPW4 351 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 IRF2BPLQ9H1B7 796 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 ACTL8Q9H568 366 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 FAM105AQ9NUU6 356 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 MARCH2Q9P0N8 246 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 RNF6Q9Y252 685 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 DLGAP4Q9Y2H0 992 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 SMLR1H3BR10 107 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 WWP2O00308 870 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 TPST2O60704 377 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 CD52P31358 61 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 DAPP51397 102 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.194e-11■■■■■ 28.1
PABPC1-201ENST00000318607 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 FYTTD1Q96QD9 318 aaKnown RBP13.87□□□□□ -0.19
PABPC1-201ENST00000318607 CTPS2Q9NRF8 586 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 OLA1Q9NTK5 396 aaKnown RBP13.87□□□□□ -0.19
PABPC1-201ENST00000318607 PABPN1LA6NDY0 278 aaKnown RBP13.87□□□□□ -0.19
PABPC1-201ENST00000318607 TULP3O75386 442 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 PTNP21246 168 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 POLD2P49005 469 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 PPP5CP53041 499 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 VLDLRP98155 873 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 SCAPQ12770 1279 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 TUBA3CQ13748 450 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
PABPC1-201ENST00000318607 AGAP7PQ5VUJ5 663 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 PARP16Q8N5Y8 322 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 ELOVL6Q9H5J4 265 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 OPTCQ9UBM4 332 aa13.87□□□□□ -0.19
PABPC1-201ENST00000318607 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
PABPC1-201ENST00000318607 C5orf42Q9H799 3197 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms