RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 AIG1Q9NVV5 245 aa13.01□□□□□ -0.33
CASC4-201ENST00000299957 TMEM181Q9P2C4 612 aa13.01□□□□□ -0.33
CASC4-201ENST00000299957 KCNE2Q9Y6J6 123 aa13.01□□□□□ -0.33
CASC4-201ENST00000299957 LSM1O15116 133 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 TULP3O75386 442 aa13□□□□□ -0.33
CASC4-201ENST00000299957 IER5LQ5T953 404 aa13□□□□□ -0.33
CASC4-201ENST00000299957 RAET1GQ6H3X3 334 aa13□□□□□ -0.33
CASC4-201ENST00000299957 HMBOX1Q6NT76 420 aa13□□□□□ -0.33
CASC4-201ENST00000299957 KDELC1Q6UW63 502 aa13□□□□□ -0.33
CASC4-201ENST00000299957 CHERPQ8IWX8 916 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 MYRFLQ96LU7 910 aa13□□□□□ -0.33
CASC4-201ENST00000299957 ZNF597Q96LX8 424 aa13□□□□□ -0.33
CASC4-201ENST00000299957 CITED4Q96RK1 184 aa13□□□□□ -0.33
CASC4-201ENST00000299957 DERL2Q9GZP9 239 aa13□□□□□ -0.33
CASC4-201ENST00000299957 DCSTAMPQ9H295 470 aa13□□□□□ -0.33
CASC4-201ENST00000299957 SNTG1Q9NSN8 517 aa13□□□□□ -0.33
CASC4-201ENST00000299957 PCDHGA8Q9Y5G5 932 aa13□□□□□ -0.33
CASC4-201ENST00000299957 C2orf78A6NCI8 922 aa13□□□□□ -0.33
CASC4-201ENST00000299957 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
CASC4-201ENST00000299957 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
CASC4-201ENST00000299957 BUD31P41223 144 aaPredicted RBP13□□□□□ -0.33
CASC4-201ENST00000299957 ADAM17P78536 824 aa13□□□□□ -0.33
CASC4-201ENST00000299957 HSPB3Q12988 150 aa13□□□□□ -0.33
CASC4-201ENST00000299957 ZNF773Q6PK81 442 aa13□□□□□ -0.33
CASC4-201ENST00000299957 EXOSC8Q96B26 276 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 UROC1Q96N76 676 aa13□□□□□ -0.33
CASC4-201ENST00000299957 MCMBPQ9BTE3 642 aa13□□□□□ -0.33
CASC4-201ENST00000299957 BEX2Q9BXY8 128 aa13□□□□□ -0.33
CASC4-201ENST00000299957 FAM124BQ9H5Z6 455 aaPredicted RBP13□□□□□ -0.33
CASC4-201ENST00000299957 GLTPD2A6NH11 291 aa13□□□□□ -0.33
CASC4-201ENST00000299957 C1QAP02745 245 aa13□□□□□ -0.33
CASC4-201ENST00000299957 CYP11A1P05108 521 aa13□□□□□ -0.33
CASC4-201ENST00000299957 TSPAN19P0C672 248 aa13□□□□□ -0.33
CASC4-201ENST00000299957 HPCAL1P37235 193 aa13□□□□□ -0.33
CASC4-201ENST00000299957 SPAM1P38567 509 aa13□□□□□ -0.33
CASC4-201ENST00000299957 C1DQ13901 141 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 NCF4Q15080 339 aa13□□□□□ -0.33
CASC4-201ENST00000299957 SUSD1Q6UWL2 747 aa13□□□□□ -0.33
CASC4-201ENST00000299957 Q6ZVU0 165 aa13□□□□□ -0.33
CASC4-201ENST00000299957 TSPAN33Q86UF1 283 aa13□□□□□ -0.33
CASC4-201ENST00000299957 GHDCQ8N2G8 530 aa13□□□□□ -0.33
CASC4-201ENST00000299957 C1orf52Q8N6N3 182 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 FAM86B1Q8N7N1 296 aa13□□□□□ -0.33
CASC4-201ENST00000299957 TMEM125Q96AQ2 219 aa13□□□□□ -0.33
CASC4-201ENST00000299957 ZNF599Q96NL3 588 aa13□□□□□ -0.33
CASC4-201ENST00000299957 GFM1Q96RP9 751 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 MRPL17Q9NRX2 175 aaKnown RBP13□□□□□ -0.33
CASC4-201ENST00000299957 MTMR11A4FU01 709 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SLC35F4A4IF30 521 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 OR6C75A6NL08 312 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 RASAL1O95294 804 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 B3GALT4O96024 378 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 OPRL1P41146 370 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 MAPKAPK2P49137 400 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 TOP3AQ13472 1001 aaPredicted RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 Q6ZPB1 254 aaPredicted RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 RBM23Q86U06 439 aaKnown RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 DTX3Q8N9I9 347 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 LEMD2Q8NC56 503 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 INPP5KQ9BT40 448 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SDR39U1Q9NRG7 319 aaPredicted RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 TREX1Q9NSU2 369 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 TMEM248Q9NWD8 314 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 C14orf119Q9NWQ9 140 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 KLHL20Q9Y2M5 609 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 A0A1W2PRU2 124 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 M0QX08 132 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 AP2A2O94973 939 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SCELO95171 688 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 MT-ND2P03891 347 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 ENO2P09104 434 aaPredicted RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 ALPPL2P10696 532 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 RXRGP48443 463 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 CDC42P60953 191 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 DSC3Q14574 896 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 ADGRF1Q5T601 910 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 TBPL2Q6SJ96 375 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 CLECL1Q8IZS7 167 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 HJURPQ8NCD3 748 aaPredicted RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 ENKURQ8TC29 256 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 HEPHQ9BQS7 1158 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 PHF24Q9UPV7 400 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 IDH3BO43837 385 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 ABCB7O75027 752 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 LCKP06239 509 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 BCKDHAP12694 445 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 CD247P20963 164 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 MATN1P21941 496 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 FDXRP22570 491 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SHMT2P34897 504 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 SLC11A1P49279 550 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 TUBA4AP68366 448 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 RAPSNQ13702 412 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 RTP2Q5QGT7 225 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 FAM9CQ8IZT9 166 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 UXS1Q8NBZ7 420 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms