RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ILF3Q12906 894 aaKnown RBP eCLIP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 RUNX3Q13761 415 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 RAB39AQ14964 217 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 STXBP5Q5T5C0 1151 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 FAM180AQ6UWF9 173 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 TAF8Q7Z7C8 310 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 GPR180Q86V85 440 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 PHC3Q8NDX5 983 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 PRR11Q96HE9 360 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC39A3Q9BRY0 314 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 CNPPD1Q9BV87 410 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 SDCBP2Q9H190 292 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 ABCG8Q9H221 673 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 MYH10P35580 1976 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 PGRMC2O15173 223 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC22A2O15244 555 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 COCHO43405 550 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 PGRP06401 933 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 C8BP07358 591 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 SDC2P34741 201 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 KLF1Q13351 362 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 SNAPC1Q16533 368 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 FAAH2Q6GMR7 532 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 NKAPQ8N5F7 415 aaKnown RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 NXPE3Q969Y0 559 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 MFSD3Q96ES6 412 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC39A8Q9C0K1 460 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 KRCC1Q9NPI7 259 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 RABL2AQ9UBK7 228 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 POLR3HQ9Y535 204 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 PIAS3Q9Y6X2 628 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 MYH6P13533 1939 aa11.15□□□□□ -0.62
NPC1L1-201ENST00000289547 A0A088AWK7 358 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 TCRBV7S3A2A0A539 114 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 ELOVL7A1L3X0 281 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 CXorf49A8MYA2 514 aaPredicted RBP11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 RFXANKO14593 260 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 CFHP08603 1231 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 PSKH1P11801 424 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 PSMD4P55036 377 aaKnown RBP11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 FAM189BP81408 668 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 RING1Q06587 406 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 TEX44Q53QW1 395 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 LINGO4Q6UY18 593 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 CCDC36Q8IYA8 594 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 CCDC185Q8N715 623 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 NAT8LQ8N9F0 302 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 TTC29Q8NA56 475 aaPredicted RBP11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 TWIST2Q8WVJ9 160 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 NRG4Q8WWG1 115 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 TRUB1Q8WWH5 349 aaKnown RBP11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 SEC14L1Q92503 715 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 HMCESQ96FZ2 354 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 PANX1Q96RD7 426 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 TMEM209Q96SK2 561 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 PHOX2BQ99453 314 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 IL12RB2Q99665 862 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC22A4Q9H015 551 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 CHRAC1Q9NRG0 131 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 ZSCAN32Q9NX65 697 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 SUSD2Q9UGT4 822 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 CDC14AQ9UNH5 594 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 SAMD4AQ9UPU9 718 aaKnown RBP11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 SCN9AQ15858 1988 aa11.15□□□□□ -0.63
NPC1L1-201ENST00000289547 ARHGEF33A8MVX0 844 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 MATN3O15232 486 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 INSIG1O15503 277 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF10P21506 573 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ALDH9A1P49189 494 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 RPIAP49247 311 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 FBXW4P57775 412 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 SCRN3Q0VDG4 424 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CYP2A13Q16696 494 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 LIN54Q6MZP7 749 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 FSTL5Q8N475 847 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 VN1R2Q8NFZ6 395 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 POP5Q969H6 163 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZSCAN5AQ9BUG6 496 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 SNTG1Q9NSN8 517 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 SOHLH2Q9NX45 425 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 FCF1Q9Y324 198 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 IFNA16P05015 189 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 TCF4P15884 667 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 NOS3P29474 1203 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 HNRNPDQ14103 355 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 PLEKHG6Q3KR16 790 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF773Q6PK81 442 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 SPATA19Q7Z5L4 167 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZC3H3Q8IXZ2 948 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZZZ3Q8IYH5 903 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CLIP4Q8N3C7 705 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 LSM14AQ8ND56 463 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 COPS8Q99627 209 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 KLHL28Q9NXS3 571 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 MALT1Q9UDY8 824 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF840PA6NDX5 716 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 SUV39H1O43463 412 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms