RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PPT2Q9UMR5 302 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 GSNP06396 782 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 HIST1H2AGP0C0S8 130 aaPredicted RBP19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 HIST1H2ADP20671 130 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 PPM1AP35813 382 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 LAPTM5Q13571 262 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 ZBED5Q49AG3 693 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 CHST15Q7LFX5 561 aaPredicted RBP19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 ERI1Q8IV48 349 aaKnown RBP19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 MICU2Q8IYU8 434 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 CLEC4FQ8N1N0 589 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 TCAIMQ8N3R3 496 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 LEMD2Q8NC56 503 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 KREMEN2Q8NCW0 462 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 OR2A12Q8NGT7 310 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 FAM162AQ96A26 154 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 TCEAL4Q96EI5 215 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 SLC47A1Q96FL8 570 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 APIPQ96GX9 242 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 HIST1H2AHQ96KK5 128 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 HIST1H2AJQ99878 128 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 SH3GL1Q99961 368 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 H2AFJQ9BTM1 129 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 EBF1Q9UH73 591 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 SNX6Q9UNH7 406 aa19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 HEMK1Q9Y5R4 338 aaPredicted RBP19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 PRRC2BQ5JSZ5 2229 aaKnown RBP19.03■□□□□ 0.64
CDC42EP1-201ENST00000249014 GFYI3L273 518 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 PRKD3O94806 890 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 PABPC1P11940 636 aaKnown RBP19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 HOXB9P17482 250 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 SDC1P18827 310 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 ITPKAP23677 461 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 GZMMP51124 257 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 CREMQ03060 361 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 LRIF1Q5T3J3 769 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 ZDHHC20Q5W0Z9 365 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 GDPD4Q6W3E5 623 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 HSD11B1LQ7Z5J1 315 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 CLVS1Q8IUQ0 354 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 GPR65Q8IYL9 337 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 RNF175Q8N4F7 328 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 BEND7Q8N7W2 519 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 L3MBTL4Q8NA19 623 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 EGLN2Q96KS0 407 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 CPPED1Q9BRF8 314 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 BBS2Q9BXC9 721 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 ATG10Q9H0Y0 220 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 KCNH6Q9H252 994 aa19.02■□□□□ 0.64
CDC42EP1-201ENST00000249014 SGTAO43765 313 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 CST1P01037 141 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 MPC1LP0DKB6 136 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ACRP10323 421 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ELK4P28324 431 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 PTPN6P29350 595 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 SHMT2P34897 504 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 CDKN2CP42773 168 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 NRIP1P48552 1158 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 HNMTP50135 292 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ESRRGP62508 458 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 PMS2P3Q13401 168 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 PON2Q15165 354 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ATG9BQ674R7 924 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 CCDC149Q6ZUS6 474 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ADIPOR2Q86V24 386 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 CALHM3Q86XJ0 350 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 HS3ST5Q8IZT8 346 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ELMOD1Q8N336 334 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 ISOC1Q96CN7 298 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 DNAJB9Q9UBS3 223 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 MAN2B2Q9Y2E5 1009 aa19.02■□□□□ 0.63
CDC42EP1-201ENST00000249014 PLXNA2O75051 1894 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 G3V2T6 193 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 ERN1O75460 977 aaKnown RBP19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 SCELO95171 688 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 LRATO95237 230 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 CXCL14O95715 111 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 LINC00271P0C7V0 271 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 THRBP10828 461 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 CDK4P11802 303 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 PRPH2P23942 346 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 S100A3P33764 101 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 PLEKHS1Q5SXH7 462 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 CCNYL2Q5T2Q4 361 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 ZNF648Q5T619 568 aaPredicted RBP19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 TMEM215Q68D42 235 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 ANKRD34AQ69YU3 496 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 GPR149Q86SP6 731 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 ZDHHC13Q8IUH4 622 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 OR52E4Q8NGH9 312 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 NETO1Q8TDF5 533 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 EMILIN2Q9BXX0 1053 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 SMURF2Q9HAU4 748 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 DCAF13Q9NV06 445 aaKnown RBP19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 CDC14AQ9UNH5 594 aa19.01■□□□□ 0.63
CDC42EP1-201ENST00000249014 A0A096LPI6 279 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 FAM220BPB1ANY3 271 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 B4GAT1O43505 415 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 CREG1O75629 220 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 CLTBP09497 229 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms